DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG44774 and Sinhcaf

DIOPT Version :9

Sequence 1:NP_001096880.1 Gene:CG44774 / 31424 FlyBaseID:FBgn0266000 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001128183.1 Gene:Sinhcaf / 686611 RGDID:1595037 Length:221 Species:Rattus norvegicus


Alignment Length:302 Identity:105/302 - (34%)
Similarity:146/302 - (48%) Gaps:88/302 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFNFHKPRVYRSADGCCICRAKSSSSRFTASRKYEKESMQCFNLNEPRNGEICNACVLLVKRYKR 65
            ||.||||::|||.:|||||||||||||||.|::|||:...||.|:|.|:|:|||||||||||:|:
  Rat     1 MFGFHKPKMYRSIEGCCICRAKSSSSRFTDSKRYEKDFQSCFGLHETRSGDICNACVLLVKRWKK 65

  Fly    66 LPIGSKRHWGHVVDARAGPGTKSMAKQKKRDNADAKSRAANGSGNSFLPEKFAKNRKSKERAATE 130
            ||.|||::|.|||||||||..|:..|.||         ....|||.....:.:|.:|..:|..::
  Rat    66 LPAGSKKNWNHVVDARAGPSLKTTLKPKK---------VKTLSGNRMKSSQISKLQKEFKRHNSD 121

  Fly   131 AAAARPSSLSLSTSAVNRPSSTSPTSDHQHSD-SNESYDDEQTLPANKPYQTRKRTAAAALATAN 194
            |.         ||:     ||.||.....:|: |:|..|.|....:|:                 
  Rat   122 AH---------STT-----SSASPAQSPCYSNQSDEGSDTEMASSSNR----------------- 155

  Fly   195 ESKEPNNKRPKLTGSYRRRQLVPQKNRRSVDNIPFFEENDLV---RLEVCCGVVFQSLSLGSTYY 256
                                            .|.|...||.   |.::|||::::. ..|..  
  Rat   156 --------------------------------TPVFSFLDLTYWKRQKICCGIIYKG-RFGEV-- 185

  Fly   257 IIDPELYKPCAKHQRIRHQQMQLQLQHQQAEAVNATPTPTTT 298
            :||..|:|||...::...::.:     :||.|    |.|.:|
  Rat   186 LIDTHLFKPCCSSKKAAAEKPE-----EQAPA----PLPIST 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG44774NP_001096880.1 FAM60A 2..269 CDD:292039 98/270 (36%)
SinhcafNP_001128183.1 FAM60A 2..198 CDD:405974 98/270 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354585
Domainoid 1 1.000 151 1.000 Domainoid score I4258
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008153
OrthoInspector 1 1.000 - - otm44467
orthoMCL 1 0.900 - - OOG6_110635
Panther 1 1.100 - - LDO PTHR13422
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.840

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