DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6903 and hgsnat

DIOPT Version :9

Sequence 1:NP_001284872.1 Gene:CG6903 / 31423 FlyBaseID:FBgn0029737 Length:576 Species:Drosophila melanogaster
Sequence 2:XP_002660455.2 Gene:hgsnat / 100329505 ZFINID:ZDB-GENE-140106-144 Length:643 Species:Danio rerio


Alignment Length:625 Identity:224/625 - (35%)
Similarity:314/625 - (50%) Gaps:101/625 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HLDMRALSVDEFYLYLRSEFSSQTHLYSLSDECYTC---PYTKVKALPAADVAAVVVEPLRLSSA 75
            |.....|.:||..|.:.:|...:..||.|||.||.|   |...:.|.|.:...|.|...:....|
Zfish    58 HRKTSVLKMDEAALSVINEVEEEMVLYVLSDHCYQCLPQPLGMIPARPTSGTPASVGFVVGTQHA 122

  Fly    76 YSL-------------NFKIFDLDQGHYAYDNVSSLCWLRRSDLQEFGVYNLTLQANGTCAFAVD 127
            .:|             ||...  :||:|:       .|::          ||...:...|....|
Zfish   123 LTLLINSTTTPQQCKVNFHFG--EQGNYS-------LWVK----------NLNEPSQINCEMITD 168

  Fly   128 KPGV----PINYAFIAVFVLVAALLIALKLVSCAW-RYYRYDEAT-------------------- 167
            ...:    ||.:||: ||..:|||       |..| ...|.|..|                    
Zfish   169 SDPINSYLPILFAFL-VFAFLAAL-------SAIWSTVKRLDAVTNLLIRLGGTVETERLINSEL 225

  Fly   168 ----AAADSIGEAATKATQRKRLRSLDTFRGISIVLMIFVNSGGGGYAWIEHAAWNGLHLADVVF 228
                ...|:..|:...||..:||||||||||:|:|:|:|||.|||.|.:..|.:||||.:||:||
Zfish   226 GTPNRLVDASTESIIPATTGRRLRSLDTFRGLSLVIMVFVNYGGGRYWFFRHESWNGLTVADLVF 290

  Fly   229 PSFLWIMGVCIPLSVKSQLSRGSSKARICLRILWRSIKLFVIGLCL---NSMSGP-NLEQLRIMG 289
            |.|::|||..|.||:...|.||..:..:..::.|||::||:||:.:   |...|| :.:.|||.|
Zfish   291 PWFVFIMGTSIGLSLSGSLRRGVKRTHLLWKVFWRSLQLFLIGVIIINPNYCQGPLSWDSLRIPG 355

  Fly   290 VLQRFGVAYLVVAILHTLCCRREPISPQR----------SWQRAVHDVCLFSGELAVLLALVATY 344
            ||||.|..||:||.|..      .:||.|          .|   |||:||:......::.|...:
Zfish   356 VLQRLGFTYLIVAALDL------AVSPDRLTNLSSETCWYW---VHDICLYWPAWLCVIILETVW 411

  Fly   345 LGLTFGLRVPGCPRGYLGPGGKHDYNAHPKCIGGAAGYADLQVLGNAHIYQHPTAKYVYDST-AF 408
            |.|||.|.|||||.|||||||..|:..:..|.||||||.|..:|.:.||||.|:::.:|.:| .|
Zfish   412 LCLTFLLPVPGCPTGYLGPGGIGDFGQYQNCTGGAAGYIDRWLLKDNHIYQTPSSRVLYLTTMPF 476

  Fly   409 DPEGIFGCILSVVQVLLGAFAGVTLLVHPNFQSR--IRRWTLLAILLGLIGGALCGFSREGGAIP 471
            ||||:.|.|.|::...||..|| .:|:|...|.|  |.|:.:..::||:|...|...||..|.||
Zfish   477 DPEGVLGSINSILMAFLGLQAG-KILLHYRDQHRQIITRFLMWGLILGIISAVLTKCSRNDGFIP 540

  Fly   472 MNKNLWSLSFVCVTVSLALLILSLMYYFIDVRETWSWSGYPFTECGMNAIVMYVGHSVLHKMLPW 536
            :||||||||:|......|.:.|...||.:||:: | |||.||...|||:|::||||.|..:..|:
Zfish   541 VNKNLWSLSYVTTLSCFAFVALVFFYYTVDVKK-W-WSGAPFFYPGMNSILVYVGHEVFEEYFPF 603

  Fly   537 HWRIGEMNTHFMLLLEATWNTLVWVGIALYLDAQEFYYSV 576
            .|::....:|...|.:....|.:||.||..|..::.::.:
Zfish   604 RWKMANSQSHTEHLAQNLLATSIWVFIAFLLYRKKIFWKI 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6903NP_001284872.1 DUF418 185..542 CDD:304389 167/373 (45%)
hgsnatXP_002660455.2 DUF418 247..643 CDD:304389 175/407 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589390
Domainoid 1 1.000 198 1.000 Domainoid score I3022
eggNOG 1 0.900 - - E1_COG4299
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15586
Inparanoid 1 1.050 332 1.000 Inparanoid score I2414
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1028480at2759
OrthoFinder 1 1.000 - - FOG0004688
OrthoInspector 1 1.000 - - otm25560
orthoMCL 1 0.900 - - OOG6_103546
Panther 1 1.100 - - LDO PTHR31061
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5848
SonicParanoid 1 1.000 - - X3874
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

Return to query results.
Submit another query.