DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4041 and CG12241

DIOPT Version :10

Sequence 1:NP_572197.4 Gene:CG4041 / 31422 FlyBaseID:FBgn0029736 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster


Alignment Length:688 Identity:147/688 - (21%)
Similarity:230/688 - (33%) Gaps:252/688 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 HERYVQMDQRLRQL----LESCLSVLPKRRPLPGELLEHPIFEEVLL--DLKKQKMQPLSPETEH 284
            ||.||..::..|:|    .|..|..||            |:.||:.:  .|:.....|.|..|. 
  Fly    12 HEGYVGREEHTRKLQNLGSEDDLGELP------------PMMEELSVADGLRPNPGGPFSALTA- 63

  Fly   285 LPLLLRCPLSQIYHLW------QLAGGDVQAEL--------------------KKEGLIRSEAPI 323
                         .:|      :|.||   |||                    :::|..:|...:
  Fly    64 -------------SMWPQEILAKLGGG---AELASGPNDQPEYRFDEFGFRVEEEDGPEQSSNKL 112

  Fly   324 LGLPQIVRLSGASVCPGRSQAQLMDDRVVPLRLKALLQRLSGLPAAVYFPLLHSPRFPAH--FAR 386
            |.:|.:            ..||               |||..:               ||  |:.
  Fly   113 LSIPFV------------EDAQ---------------QRLQWI---------------AHLEFSH 135

  Fly   387 ELQELPLVIREKDIEY-QFQRVRLFARLLQGYPHTAEQLQREAAVDVPPLLRGPIWAALLEVVPN 450
            ..:...|.....|:.. :.:::|...|  ||.|||               ||..:|..|     :
  Fly   136 NKEAAELSWEHVDVMLPRTEKLRNMVR--QGIPHT---------------LRAQMWMRL-----S 178

  Fly   451 GSYAKIDKFTSTS--------------TDRQIEVDIPRCHQYDELLSSPDGH--RKLRRLLK--A 497
            |:.||..| :.||              |.:|||.|:.|....:...|:|:|.  .:|||:|:  |
  Fly   179 GALAKKQK-SETSYHDIVKASSNDQLMTSKQIEKDLLRILPTNACFSNPNGTGIPRLRRILRGIA 242

  Fly   498 WVTAHPQYVYWQGLDSLTAPFLYLNFNNEELAFLSLFKFIPKYLQWFFLKDN-----------SA 551
            |:  .|...|.||...:.|..|.  |..||.||..:...:...|...:....           ..
  Fly   243 WL--FPDIGYCQGTGVIVACLLL--FMEEENAFWMMATIVEDLLPASYYSSTLLGIQADQRVMHT 303

  Fly   552 VIKEYLSKFSQLTAFHEPLLAQHLASISFIPELFAIPWFLTMFSHVFPLHKILHLWDKLMLGDSS 616
            :|..|||...:....|:..|:           |..:.||||:|::|..:..::.:||        
  Fly   304 LIANYLSSVDESLRKHDIELS-----------LITLHWFLTLFANVVHMKILVRIWD-------- 349

  Fly   617 YPLFIGIAILRQLRSTLL-------------TSGFNECILLFSDLPDIVMDGCVLESQKMYEATP 668
            :..:.|..:|.||...:|             ...||.    .||:|..|.|..||..|.:.....
  Fly   350 WFFYEGSIVLFQLTLGMLKVKEQDLKHLENSAQIFNS----LSDIPGEVTDVEVLFRQALEVGGS 410

  Fly   669 KSIT-----HRQHALRLQPPQALDIGVADVELKHLQQEQCPRISAKDVQFLLD--------NSPA 720
            .|.|     .|:|...|...|...||..:. ..:|.::|..|...:..:.:|:        |...
  Fly   411 LSQTVIDTHRRRHLAYLMADQGHQIGNPEA-APNLPKQQLARRQVRKSKSILEAFLFRGDGNEGD 474

  Fly   721 EL---------ALIDLR-SVVEFGRVHVPHSINIPFATVQLGEQRLEALQVPQLEAQLRGKIVVC 775
            :|         .|:||| ::::.||    |.|.|                    |.:|.|.|.:.
  Fly   475 QLKNKNIRQTEILVDLREAILKVGR----HFITI--------------------EPKLAGHIQLT 515

  Fly   776 VS-NIHQHSVEFSHFLVACGVQRTCILHKGFNVLHSIE 812
            .: :...|:.:..:|:   .|.||  ..:....||..|
  Fly   516 ANYSTESHAKDHENFI---NVART--RKRRAKALHDFE 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4041NP_572197.4 Protein Kinases, catalytic domain 48..263 CDD:473864 11/40 (28%)
TBC 432..634 CDD:214540 56/230 (24%)
RHOD_Kc 706..810 CDD:238783 22/122 (18%)
CG12241NP_650432.1 TBC 161..375 CDD:214540 63/259 (24%)
SH3_SGSM3 540..592 CDD:212747 3/9 (33%)
RUN_SGSM3 570..783 CDD:439050
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.