DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4041 and CG16896

DIOPT Version :9

Sequence 1:NP_572197.4 Gene:CG4041 / 31422 FlyBaseID:FBgn0029736 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_611973.2 Gene:CG16896 / 37977 FlyBaseID:FBgn0035073 Length:988 Species:Drosophila melanogaster


Alignment Length:903 Identity:173/903 - (19%)
Similarity:293/903 - (32%) Gaps:302/903 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 MRHPPLAIAQILRIFYQV-ACGINVLSRHHLVAHNVEPKHILLSSDGQRVKLFNYGLHHMTKGGA 149
            :.|......|.|||  |: ||..|.||...:|   ::.:..:...|..|.:.:..|. .|.|...
  Fly    99 VHHTIKEAGQALRI--QIAACCFNELSNKLVV---IDKRGNVFVFDFVRKRYWRLGF-RMPKAKL 157

  Fly   150 YVPFPIGNIRYMAPER------------LLGLNGNVKSDV-----WSLAL--------------- 182
            ..|.|:....|:...:            :||::|.|.|..     ||.:|               
  Fly   158 IRPSPLHGSDYIVGNKTGHIFTIDVDNSILGVDGEVGSAALEELSWSNSLQNARSSIALMRFGSD 222

  Fly   183 -VMVEL-ILQIELWPKLKLSNVVRKILAF---------GKSNGALEKIAREHQCHERYVQMDQRL 236
             ::|.| .|::........|....|..||         |.||.:|. :...|....  ::|.|.:
  Fly   223 ALLVNLHTLEVSHQLDFDQSRYTLKFAAFLPHSDQFFIGFSNDSLH-VWSSHSLST--LRMGQPI 284

  Fly   237 RQLLESCLSVLPKRRPLPGELLEHP----IFEEVLLDLKK------------------------- 272
            :..... |.:||....:|..:|..|    :.|::..|.:.                         
  Fly   285 KARNRK-LRLLPAAESIPEIVLRSPDDSDLEEDLTFDCQHYDFADGMLLSYCFTPDGNKMCLSTL 348

  Fly   273 --------------QKMQPLSPETEHLPLLLRCPLSQIYHLWQLAGGDVQAELKKEGLI-----R 318
                          :||..|:..|.|....|..|                    ||.::     |
  Fly   349 DGYLLLLSVASFDLEKMYRLTDFTLHQMAFLSQP--------------------KERIVFGITTR 393

  Fly   319 SEAPILGLPQ-----IVRLSGASVCPGRSQAQLMDDRVVPL-----------------RLKALLQ 361
            ::|.:|.|..     ||:.|.|     ||.:...|.:::.:                 .|:|.::
  Fly   394 NQAVMLDLANTDHKLIVQRSNA-----RSLSLSRDGKLLSVTSRCGEVNVWSTCRIFNALQAQIR 453

  Fly   362 RLSGLPAAVYFPLLHSPRFPAH----FARELQEL--PLVIREKDIEYQFQRVRLFARLLQGYPHT 420
            .||.:.:....|   :|..|..    .::||::|  |            ||::...:....||..
  Fly   454 CLSQVKSTFKQP---NPLPPCSVGGGVSKELRDLLNP------------QRLKTMLKEYGCYPEK 503

  Fly   421 AEQLQREAAVDVPPLLRGPIWAALLEVVPNGSYAKIDKFTSTSTDRQIEVDIPRCHQYDEL--LS 483
            ...|               ||.:||::..||.                        |:.||  |.
  Fly   504 YRYL---------------IWTSLLDLPCNGP------------------------QFQELIKLG 529

  Fly   484 SP-------------DGHRKLRRLLKAW--------VTAHPQYVYWQGLDSLTAPFLYLNFNNEE 527
            :|             :.|:: |.::|.|        |.||..:     :..|..||:.....|..
  Fly   530 APLLVRNRAKKLKIRNDHQR-RVVIKIWSCLAQWCKVLAHADF-----MPHLIFPFVKRMPKNSL 588

  Fly   528 LAFLSLFKFIPKYLQWFFLKDNSAVIKEYLSKFSQLTAFHEPLLAQHLASISFIPELFAIPWFLT 592
            :.|..:...:..:.|..| :.:......||:....:....:..|.:...|...:|:.||.|...|
  Fly   589 VCFELIATLVLNHFQLCF-EFHPLPPSNYLAMCENILQHCDEQLCKFYKSQEMLPKDFAWPLLST 652

  Fly   593 MFSHVFPLHKILHLWDKLMLGDSSYPLFIGIAILRQLRSTLLTSGFNECILLF------SDLPDI 651
            .||.|....:.|.|||.:......:|:|:.:|.....|..:|.......:|.|      .|:..:
  Fly   653 AFSEVLEEEQWLSLWDNIFSEPPWFPVFLVVAYNLINREIILRLPDKRSVLFFFHDQNPVDISKL 717

  Fly   652 ------VMDGCVLESQKMYEAT----------PKSITHRQHALRLQPPQALDI----GVADVELK 696
                  :|..|.|........|          ||.:.:....:..|..||:.:    ...|..::
  Fly   718 LSKARKLMSKCALALHPQRFMTHFSPIPKGVYPKFLKYPSEWIDEQEYQAVSLIKHNQEIDARIR 782

  Fly   697 HLQQEQCPRISAKDVQFLLDNSPAELALIDLRSVVEFGRVHVPHSINIPFATVQLGEQRL----E 757
            ||:.|:. :|..:....|.....|       |.:.|..||:..        |:...|:|:    :
  Fly   783 HLELEEV-KIMERLETGLKQEEHA-------RRLKEMERVYQD--------TIHREEERITCQRK 831

  Fly   758 ALQVPQLEAQLRGKIVVCVSNIHQHSVEFSHFLVACGVQRTCIL--HKGFNVL-HSIE 812
            .|...|:|.:.|...|  ::.:.:..            ||..||  .|..::| ||||
  Fly   832 MLLTYQMEVRRRKSEV--ITKLQESE------------QRRKILEMEKDMDLLMHSIE 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4041NP_572197.4 PKc_like 45..272 CDD:304357 50/233 (21%)
TBC 432..634 CDD:214540 45/224 (20%)
RHOD_Kc 706..810 CDD:238783 21/110 (19%)
CG16896NP_611973.2 WD40 228..>467 CDD:225201 46/270 (17%)
BAR 766..>952 CDD:299863 31/140 (22%)
SPFH_like <817..909 CDD:302763 18/81 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1093
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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