DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4041 and Tbc1d31

DIOPT Version :10

Sequence 1:NP_572197.4 Gene:CG4041 / 31422 FlyBaseID:FBgn0029736 Length:819 Species:Drosophila melanogaster
Sequence 2:NP_001128314.1 Gene:Tbc1d31 / 299949 RGDID:1587370 Length:1061 Species:Rattus norvegicus


Alignment Length:678 Identity:136/678 - (20%)
Similarity:233/678 - (34%) Gaps:207/678 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 NVVRKILAFGKSNGALEKIAREHQCH---------ERYVQMDQRLRQLLESCLSVLPK-----RR 251
            |::.|:.|..:....|....:.:..|         .|.:||..::|.:..  |..||.     ..
  Rat   214 NILYKVFAVTRDGRILAAGGKSNHVHLWCLEATQLFRIIQMPTKVRAVRH--LEFLPDSFDAGSN 276

  Fly   252 PLPGELLEHPIFEEVLLDLKKQKMQ-----------PLSPETEHLPLLLRCPLSQIYHLWQLAGG 305
            .:.|.|.:..|...|.:...|...|           .:||...::..::......:|        
  Rat   277 QVLGVLSQDGIMRFVNIQTCKLLFQIGTVEEGVSSSVISPHGRYITAIMENGSLNVY-------- 333

  Fly   306 DVQAELKKEGLIRSEAPILGLPQIVRLSGASVCPGRSQAQLMDDRVV-PLRLK-------ALLQR 362
            .||| |.:|  |....|.| :..|..|...:|.....:.::|..||. |.|.|       .|.|.
  Rat   334 SVQA-LTQE--INKPPPPL-VKVIEDLPNNTVSSNNLKVKVMSGRVQRPARCKERKNQTRVLKQD 394

  Fly   363 LSGLPAAVYFPLLHSPRFPAHFARELQELPLVIREKDIEYQFQRVRLFARLLQGYPHTAEQLQRE 427
            |:|                          .|..:|.::.....:.||.. ||:||.         
  Rat   395 LTG--------------------------NLENKENELSEGLNKKRLQV-LLKGYG--------- 423

  Fly   428 AAVDVPPLLRGPIWAALLEVVPNGS--YAKIDKFTSTSTDRQIEVDIPRCHQYDELLSSPDGHRK 490
               :.|...|..||.:||::..|.:  .:.:||.|..:     .:|:.:.:        |...|:
  Rat   424 ---EYPTKYRMFIWRSLLQLPENHTAFSSLMDKGTHAA-----YLDLQKKY--------PIKSRR 472

  Fly   491 LRRLLKAWVTAHPQYVYWQGLDS-------LTAPFLYLNFNNEELAFLSLFKFIPKYLQ-WFFLK 547
            |.|:|:..::|   ..:|..:.|       |..||:.|..||:.:.|..:...|..:.| ||...
  Rat   473 LLRVLQRTLSA---LAHWSAIFSDMPYLPLLAFPFVKLFQNNQLICFEVVATLIINWCQHWFEYF 534

  Fly   548 DNSAVIKEYLSKFSQLTAFHEPLLAQHLASISFIPELFAIPWFLTMFSHVFPLHKILHLWDKLML 612
            .|..:  ..|:....:.|||:..|.||........:::|.|...|:||.|....:.|.|:|.:. 
  Rat   535 PNPPI--NILTMIENVLAFHDKELLQHFIDRDITSQVYAWPLLETLFSEVLTREEWLRLFDNIF- 596

  Fly   613 GDSSYPLFIGIAILRQ---LRSTLLTSGFNECIL------LFSDLPDIVMDGCVLESQKMYEATP 668
              ||:|.|:.:.::..   .|:.||     .|.|      .|....::.::..:.|...:.|.||
  Rat   597 --SSHPSFLLMTVVAYNTCSRAPLL-----NCTLKDDFEYFFHHRNNLDLNVVIREVYHLMETTP 654

  Fly   669 KSI------------THRQHALRLQPPQALDIGVADVELKHLQQEQCPRISAKDVQFL-----LD 716
            ..|            |..|:.:..|.|:.    :.|.:.|..:     ||...::.||     ::
  Rat   655 ADIHPNSMLDAFVALTKGQYPIFNQYPKF----IVDYQTKERE-----RIRNDELDFLRERQTVE 710

  Fly   717 NSPAEL----------------------------------------ALIDLRSVVEFGRVHVPHS 741
            |..||:                                        .|..::..:|...:|:..:
  Rat   711 NMQAEVDEQRAKDEAWYQKQEMLRRAEETRREMLLQEEEKMAQQRHRLAAVKRELEIKEIHLQDA 775

  Fly   742 INIPFATVQLGEQRLEALQVPQLEAQLR 769
                      ..:||..||..|.|.:||
  Rat   776 ----------ARRRLLKLQQDQREMELR 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4041NP_572197.4 Protein Kinases, catalytic domain 48..263 CDD:473864 14/75 (19%)
TBC 432..634 CDD:214540 52/214 (24%)
RHOD_Kc 706..810 CDD:238783 17/109 (16%)
Tbc1d31NP_001128314.1 WD40 repeat 43..81 CDD:293791
WD40 44..321 CDD:441893 20/108 (19%)
WD40 repeat 86..123 CDD:293791
WD40 repeat 130..164 CDD:293791
WD40 repeat 171..207 CDD:293791
WD40 repeat 215..253 CDD:293791 5/37 (14%)
WD40 repeat 261..290 CDD:293791 6/30 (20%)
RabGAP-TBC 462..605 CDD:480642 40/158 (25%)
DUF5401 <684..>998 CDD:375164 20/125 (16%)
Blue background indicates that the domain is not in the aligned region.

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