DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32772 and AT3G45260

DIOPT Version :9

Sequence 1:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001327332.1 Gene:AT3G45260 / 823664 AraportID:AT3G45260 Length:446 Species:Arabidopsis thaliana


Alignment Length:447 Identity:90/447 - (20%)
Similarity:151/447 - (33%) Gaps:125/447 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 QQHQNPQQQQHQNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSL 146
            |:|..|....:.|....       .|:....||....| .|.::|    ...|         :||
plant    19 QEHIAPNPNPNPNPTSS-------NSAKRKRNLPGNPD-PDAEVI----ALSP---------NSL 62

  Fly   147 MTHIRNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTG 211
            ||       ..:|:|..|:|||.:..||:.|.|.|  :.|::       ..|.||....::    
plant    63 MT-------TNRFICEVCNKGFKRDQNLQLHRRGH--NLPWK-------LKQRTNKEQVKK---- 107

  Fly   212 ERPFVCNEPEC-----GRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVT 271
             :.::|.|..|     .|:...:|.:..|....|..:::.|:.|:||:..::.    .:||:.: 
plant   108 -KVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMSD----WKAHSKI- 166

  Fly   272 GYYCPRCPEKNFKLQSQLHTHMKTHGLAFPYECDKCDEKFLQQAHLDQHLKMHDEFKFKCDICPS 336
                  |..|.                   |.|| |...|.::.....|       :..||    
plant   167 ------CGTKE-------------------YRCD-CGTLFSRKDSFITH-------RAFCD---- 194

  Fly   337 SFNQESLLKKHVQRHVEGRYLSCPVANCAESFAVRQHLSK-HLLTNHAHHELPPPKRSKKAGTLQ 400
            :..:||           .|::|.|.|....:.|:...::. ::..||...:|.............
plant   195 ALAEES-----------ARFVSVPPAPAYLNNALDVEVNHGNINQNHQQRQLNTTSSQLDQPGFN 248

  Fly   401 TSQQPLAMIGQPL------------------SLQ---HTTGQRGRP---PKNKNKATTLAATAIK 441
            |::..:|.:||.|                  |||   |..||....   .:|.|....:....|.
plant   249 TNRNNIAFLGQTLPTNVFASSSSPSPRSASDSLQNLWHLQGQSSHQWLLNENNNNNNNILQRGIS 313

  Fly   442 IEINESLHSQHISNVSGLSIQQQINQHMQQQAAQQQAQQQAAQQQQQQAAQQQQQAA 498
            ....|......|||.|..|.:.:.|.:...|...|.|...|....|:.|....::::
plant   314 KNQEEHEMKNVISNGSLFSSEARNNTNNYNQNGGQIASMSATALLQKAAQMGSKRSS 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 51/259 (20%)
C2H2 Zn finger 133..153 CDD:275368 5/19 (26%)
zf-H2C2_2 145..170 CDD:290200 10/24 (42%)
C2H2 Zn finger 161..181 CDD:275368 9/19 (47%)
zf-H2C2_2 173..198 CDD:290200 6/24 (25%)
C2H2 Zn finger 189..209 CDD:275368 3/19 (16%)
C2H2 Zn finger 217..239 CDD:275368 6/26 (23%)
zf-H2C2_2 231..256 CDD:290200 6/24 (25%)
C2H2 Zn finger 247..267 CDD:275368 4/19 (21%)
C2H2 Zn finger 275..296 CDD:275368 2/20 (10%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 331..351 CDD:275368 4/19 (21%)
C2H2 Zn finger 359..380 CDD:275368 3/21 (14%)
AT3G45260NP_001327332.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 44 1.000 Inparanoid score I2683
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

Return to query results.
Submit another query.