DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32772 and Zscan20

DIOPT Version :9

Sequence 1:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_038967172.1 Gene:Zscan20 / 500549 RGDID:1562996 Length:1128 Species:Rattus norvegicus


Alignment Length:407 Identity:110/407 - (27%)
Similarity:168/407 - (41%) Gaps:95/407 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 SSSTASSSDSDAIAQ----QQQHQNPQQQQHQNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLI 126
            |....|....:|:.|    ::.|:|..:.:.:|:....:       .||.|:|:...|.:.:.|.
  Rat   733 SPGALSRYTREAVCQPHGWREDHENGDEGEWRNTLPWDE-------CSSEEDLEKLIDHQGLYLT 790

  Fly   127 FNEEGSCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVD 191
             .|...|....|:||||.......|.|:.|:.:.|....|.|:..|||..|:|||..::||:|::
  Rat   791 -EEPYRCDTHVKSFSRKVHCFAPQRIHAGEKPYKCLDTGKSFSDHANLSTHQRIHVGEKPYRCLE 854

  Fly   192 CGKTFTQITNLNNHRRLHTGERPF---VC-------------------------NE--------- 219
            |||:|...:||..|:|.||||:|:   ||                         ||         
  Rat   855 CGKSFNDPSNLITHQRTHTGEKPYKYGVCWKSFTESSNRLKPQRIHLQGTPDQRNEPGEDFGQSP 919

  Fly   220 -----------------------------------------PECGRSFAQVTNLNNHMKSHHKVQ 243
                                                     |||||.|::.:.|.:|.:.|...:
  Rat   920 SFSAYWRDSTRERPKQPQNISMGADSPGACHPNSGEKLYPCPECGRCFSKNSALMSHQRIHTGEK 984

  Fly   244 QYCCNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKLQSQLHTHMKTHGLAFPYECDKCD 308
            .|.|..|.:.|::.:||..||:.|.|...:.|..| .|.|..:|:|.||.:.|....||:|.:|.
  Rat   985 PYECVECGRSFSKSSSLANHLRTHTGEKPHKCADC-GKCFSERSKLITHHRVHTGEKPYKCPECG 1048

  Fly   309 EKFLQQAHLDQHLKMH-DEFKFKCDICPSSFNQESLLKKHVQRHVEGRYLSCPVANCAESFAVRQ 372
            :.|..:::|..|.::| .|..:||..|...|||.|.|..|.:.|...:...|  ..|.:.|....
  Rat  1049 KFFRDRSNLITHQRIHTGEKPYKCRECGKCFNQSSSLNIHQRIHTGEKPYKC--TECGKDFNNSS 1111

  Fly   373 HLSKHLLTNHAHHELPP 389
            |.|.|..| |...:.||
  Rat  1112 HFSAHRRT-HTGGKAPP 1127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 93/332 (28%)
C2H2 Zn finger 133..153 CDD:275368 7/19 (37%)
zf-H2C2_2 145..170 CDD:290200 6/24 (25%)
C2H2 Zn finger 161..181 CDD:275368 8/19 (42%)
zf-H2C2_2 173..198 CDD:290200 13/24 (54%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
C2H2 Zn finger 217..239 CDD:275368 11/96 (11%)
zf-H2C2_2 231..256 CDD:290200 7/24 (29%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
C2H2 Zn finger 275..296 CDD:275368 8/20 (40%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
C2H2 Zn finger 359..380 CDD:275368 6/20 (30%)
Zscan20XP_038967172.1 SCAN 136..221 CDD:396558
Myb_DNA-bind_4 410..491 CDD:404682
Myb_DNA-bind_4 571..652 CDD:404682
COG5048 820..>1122 CDD:227381 85/305 (28%)
C2H2 Zn finger 824..844 CDD:275368 8/19 (42%)
C2H2 Zn finger 852..872 CDD:275368 9/19 (47%)
C2H2 Zn finger 880..900 CDD:275368 2/19 (11%)
C2H2 Zn finger 960..980 CDD:275368 8/19 (42%)
C2H2 Zn finger 988..1008 CDD:275368 7/19 (37%)
C2H2 Zn finger 1016..1036 CDD:275368 8/20 (40%)
C2H2 Zn finger 1044..1064 CDD:275368 5/19 (26%)
C2H2 Zn finger 1072..1092 CDD:275368 8/19 (42%)
C2H2 Zn finger 1100..1120 CDD:275368 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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