DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32772 and Zkscan1

DIOPT Version :9

Sequence 1:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001020931.1 Gene:Zkscan1 / 498160 RGDID:1560616 Length:562 Species:Rattus norvegicus


Alignment Length:303 Identity:87/303 - (28%)
Similarity:142/303 - (46%) Gaps:21/303 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RCSEQLTNNSNFHQSAAAAAAVAASASAAVAASAAAAATSSSTASSSDSDAIAQQQQHQNPQQQQ 91
            |.|.|:...:.|.|.:.......:::.|.|            ...|:....||.:.|.:..::::
  Rat   252 RDSRQMNLGTVFSQGSENRNGSESTSKAEV------------KGDSTSHGEIAGRFQKEFGEKRE 304

  Fly    92 HQNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHIRN---- 152
            .|....::||:...:.:...:.......:::......|.|.... .|...|..||..:..|    
  Rat   305 QQGRVIERQQKNPEEKTGKEKKAPGPPTAKEKKPTTGERGPREK-GKGLGRSFSLSANFNNTPEE 368

  Fly   153 -HSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFV 216
             .|..:...|..|.|.||::::|..|:.|||.::||:|.:|||.|:..:||..|:|:||||:|..
  Rat   369 IPSGAKTHRCDECGKCFTRSSSLIRHKIIHTGEKPYECNECGKAFSLNSNLVLHQRIHTGEKPHE 433

  Fly   217 CNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEK 281
            ||  |||::|:..:||..|.:.|...:.|.||.|.|.|:|.:.|.:|.:.|.|...|.|..| .|
  Rat   434 CN--ECGKAFSHSSNLILHQRIHSGEKPYECNECGKAFSQSSDLTKHQRIHTGEKPYECSEC-GK 495

  Fly   282 NFKLQSQLHTHMKTHGLAFPYECDKCDEKFLQQAHLDQHLKMH 324
            .|...|.|..|.:.|....||:|.||.:.|.:.:.|..|.::|
  Rat   496 AFNRNSYLILHRRIHTREKPYKCTKCGKAFTRSSTLTLHHRIH 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 73/206 (35%)
C2H2 Zn finger 133..153 CDD:275368 5/24 (21%)
zf-H2C2_2 145..170 CDD:290200 8/29 (28%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 173..198 CDD:290200 12/24 (50%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
C2H2 Zn finger 217..239 CDD:275368 9/21 (43%)
zf-H2C2_2 231..256 CDD:290200 10/24 (42%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..296 CDD:275368 7/20 (35%)
C2H2 Zn finger 304..324 CDD:275368 6/19 (32%)
C2H2 Zn finger 331..351 CDD:275368
C2H2 Zn finger 359..380 CDD:275368
Zkscan1NP_001020931.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..50
SCAN 52..162 CDD:128708
SCAN 52..129 CDD:280241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..187
KRAB 226..264 CDD:279668 3/11 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..372 18/123 (15%)
C2H2 Zn finger 353..370 CDD:275368 4/16 (25%)
COG5048 <355..536 CDD:227381 68/183 (37%)
zf-C2H2 376..398 CDD:278523 7/21 (33%)
C2H2 Zn finger 378..398 CDD:275368 7/19 (37%)
zf-H2C2_2 390..414 CDD:290200 11/23 (48%)
C2H2 Zn finger 406..426 CDD:275368 9/19 (47%)
zf-H2C2_2 418..443 CDD:290200 15/26 (58%)
C2H2 Zn finger 434..454 CDD:275368 9/21 (43%)
zf-H2C2_2 446..471 CDD:290200 10/24 (42%)
C2H2 Zn finger 462..482 CDD:275368 8/19 (42%)
zf-H2C2_2 474..499 CDD:290200 9/25 (36%)
C2H2 Zn finger 490..510 CDD:275368 7/20 (35%)
zf-H2C2_2 502..527 CDD:290200 9/24 (38%)
C2H2 Zn finger 518..538 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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