DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32772 and Zkscan2

DIOPT Version :10

Sequence 1:NP_572196.3 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001419304.1 Gene:Zkscan2 / 368120 RGDID:1359568 Length:960 Species:Rattus norvegicus


Alignment Length:443 Identity:106/443 - (23%)
Similarity:172/443 - (38%) Gaps:114/443 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CFQTATLFQVPGYSIPTC--VRCSEQLTNN-----------SNFHQSAAAAAAVAASASAAVAAS 59
            |.:.:.|:.|....:..|  :|..||....           .|.|  ...:.|......|.|...
  Rat   517 CHRKSKLYGVVAEQLRECGFLRTPEQCRTKFKSLQKSYRKVKNGH--VLESCAFYKEMDALVNCR 579

  Fly    60 AAAAATSSSTASSSDSDAIAQQQQHQNPQQQQHQNSQQQQQQQQQMQSSSSSENLQSQDDSED-- 122
            .||..|::|....|.|   .|::.|...:.|:....:.::..|:.:...|.||.:..::.:|:  
  Rat   580 TAALPTNTSEEIPSLS---RQERGHIEVEPQEPTTWEPEESSQEAVLEDSGSERMSEEEITEEPE 641

  Fly   123 ------------------------VDLIFNE-EGSCPLCNK------------------TFS--- 141
                                    ..:||.: |....|..|                  .||   
  Rat   642 FEGSAGLPQSPTDFEIGNIIKEAPTQVIFKDTESHRALIEKPKRFVSQNTNPSKYGKRECFSGRH 706

  Fly   142 -------RKSSLMTHIRN-------------------------------------HSAERKFVCT 162
                   |:..||:..|:                                     |..|..:.|.
  Rat   707 WENLQGVRQGKLMSQPRDTGKAVVHQRPFVGRRPYRLLKYGENFGRSARLVCRMTHQKENPYKCG 771

  Fly   163 YCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFVCNEPECGRSFA 227
            .|.|.|.::.:|..|:||||.::|::|:||||:|...:|...|.|:||||:|:.|.  |||:.|:
  Rat   772 VCGKCFGRSRSLIRHQRIHTGEKPFKCLDCGKSFNDSSNFGAHLRIHTGEKPYRCR--ECGKCFS 834

  Fly   228 QVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKLQSQLHTH 292
            |.::|..|.::|...:.|.|..|.|.||..:..:.|.:||.|...|.|..| ||:|...::...|
  Rat   835 QSSSLIIHQRTHTGEKPYQCEECGKSFTNSSHFSAHRRAHTGENPYKCGDC-EKSFNNCTRFREH 898

  Fly   293 MKTHGLAFPYECDKCDEKFLQQAHLDQHLKMHDEFKFKCDICPSSFNQESLLK 345
            .:.|....||.|.:|.:.|.:.:.|.:|.::|...| .....||.::.|:|||
  Rat   899 RRIHTGEKPYTCAQCGKHFNKSSFLTKHREIHIREK-PLPYSPSVYSPENLLK 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_572196.3 C2H2 Zn finger 133..153 CDD:275368 8/84 (10%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 173..198 CDD:463886 13/24 (54%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
C2H2 Zn finger 217..239 CDD:275368 8/21 (38%)
SUF4-like 222..>267 CDD:411020 14/44 (32%)
C2H2 Zn finger 222..240 CDD:411020 6/17 (35%)
C2H2 Zn finger 247..267 CDD:411020 6/19 (32%)
C2H2 Zn finger 247..267 CDD:275368 6/19 (32%)
C2H2 Zn finger 275..296 CDD:275368 6/20 (30%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 331..351 CDD:275368 6/15 (40%)
C2H2 Zn finger 359..380 CDD:275368
Zkscan2NP_001419304.1 SCAN 42..148 CDD:128708
KRAB <241..282 CDD:214630
Myb_DNA-bind_4 334..415 CDD:463994
Myb_DNA-bind_4 490..571 CDD:463994 10/55 (18%)
COG5048 <766..915 CDD:227381 56/151 (37%)
C2H2 Zn finger 770..790 CDD:275368 7/19 (37%)
C2H2 Zn finger 798..818 CDD:275368 9/19 (47%)
C2H2 Zn finger 826..846 CDD:275368 8/21 (38%)
C2H2 Zn finger 854..874 CDD:275368 6/19 (32%)
C2H2 Zn finger 882..902 CDD:275368 6/20 (30%)
C2H2 Zn finger 910..930 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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