DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32772 and Clamp

DIOPT Version :10

Sequence 1:NP_572196.3 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001014498.1 Gene:Clamp / 35445 FlyBaseID:FBgn0032979 Length:566 Species:Drosophila melanogaster


Alignment Length:486 Identity:113/486 - (23%)
Similarity:162/486 - (33%) Gaps:206/486 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DTICRLCFQTATLFQVPGYSIPTCVRCSEQ------LTNNSNFH------QSAAAAAAVAASASA 54
            :||..:.|:              |..||:.      |..:...|      |.....|.....:.|
  Fly   120 NTISNISFK--------------CDVCSDMFPHLALLNAHKRMHTDGEQQQQQQHNAQAGGDSIA 170

  Fly    55 AVAASAAAAATS-------------SSTASSSDSDAIAQQQQHQN-------------------- 86
            .|:|.....|.:             ||........::.|||||::                    
  Fly   171 VVSAQGLVQAQNIIGNGQMGQIQIVSSDTLEPVQQSVMQQQQHESKASKCINCGSSMLQQSKRKG 235

  Fly    87 PQQ-------QQHQNSQQQQ---------------------QQQQQMQ----------------S 107
            |:|       |..|.:||||                     |.|.|:|                |
  Fly   236 PKQVRCESCMQAEQTAQQQQQLFVAQDGQMAHPVQIISTTPQAQAQLQQIVAAQTGGTTPKREAS 300

  Fly   108 SSSSENLQSQDDSEDVDLIFNEEG----------------------------------------- 131
            |.|..:...:.:|:.:.......|                                         
  Fly   301 SGSGHHPVKKRNSQQMTKCQKCNGSGVVLVGQHSHASHSGVGGSVKQSVTVKTECLSCRNPSKPF 365

  Fly   132 SCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTF 196
            ||.:|...|||.|||.:|.:.||.|:.:.|:.|...|.:|..|:||.||||.::||:|..||..|
  Fly   366 SCNICGGLFSRYSSLWSHKKLHSGEKNYKCSICGLAFAKAVYLKNHARIHTGEKPYKCQTCGMQF 430

  Fly   197 TQITNLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLN 261
            :|..:|.||.|.|:||||:|                              |.||:|.|.:..:|.
  Fly   431 SQSPHLKNHERTHSGERPYV------------------------------CGVCDKGFARHATLW 465

  Fly   262 QHLQAHAGVTGYYCPRCPEKNFKLQSQLHTHMKTHGLAFPYECDKCDEKFLQQAHLDQHLKMHD- 325
            .|.:.|.|          ||                   ||:|:.|...|.|.|||..|.|:|. 
  Fly   466 NHRRIHTG----------EK-------------------PYKCEICGSAFSQAAHLKNHAKVHSG 501

  Fly   326 EFKFKCDICPSSFNQESLLKKHVQRHVEGRY 356
            |..:||:||.::|.....||:|  |.:..:|
  Fly   502 EKPYKCEICSAAFADRFALKRH--RGIHQKY 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_572196.3 C2H2 Zn finger 133..153 CDD:275368 9/19 (47%)
C2H2 Zn finger 161..181 CDD:275368 8/19 (42%)
zf-H2C2_2 173..198 CDD:463886 13/24 (54%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
C2H2 Zn finger 217..239 CDD:275368 0/21 (0%)
SUF4-like 222..>267 CDD:411020 7/44 (16%)
C2H2 Zn finger 222..240 CDD:411020 0/17 (0%)
C2H2 Zn finger 247..267 CDD:411020 7/19 (37%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
C2H2 Zn finger 275..296 CDD:275368 2/20 (10%)
C2H2 Zn finger 304..324 CDD:275368 9/19 (47%)
C2H2 Zn finger 331..351 CDD:275368 7/19 (37%)
C2H2 Zn finger 359..380 CDD:275368
ClampNP_001014498.1 COG5048 <359..498 CDD:227381 62/197 (31%)
C2H2 Zn finger 367..387 CDD:275368 9/19 (47%)
C2H2 Zn finger 395..415 CDD:275368 8/19 (42%)
zf-H2C2_2 407..432 CDD:463886 13/24 (54%)
C2H2 Zn finger 423..443 CDD:275368 9/19 (47%)
C2H2 Zn finger 451..471 CDD:275368 7/19 (37%)
COG5048 475..>529 CDD:227381 23/74 (31%)
C2H2 Zn finger 479..499 CDD:275368 9/19 (47%)
C2H2 Zn finger 507..527 CDD:275368 8/21 (38%)
Blue background indicates that the domain is not in the aligned region.

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