DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32772 and Zscan5b

DIOPT Version :9

Sequence 1:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_218239.6 Gene:Zscan5b / 292566 RGDID:1559143 Length:484 Species:Rattus norvegicus


Alignment Length:247 Identity:72/247 - (29%)
Similarity:106/247 - (42%) Gaps:41/247 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SIPTCVRCSEQLTNNSNFHQSAAAAAAVAASASAAVAASAAAAATSSSTASSSDSDAIAQQQQHQ 85
            ::|:.....|:....:...||..:........|..||:....|.....||:        .:..|.
  Rat   261 AVPSSTHIRERYLALNRDLQSLRSFGGFNLPTSQGVASYTGNAEDRLKTAN--------PETAHP 317

  Fly    86 NPQQQQHQNSQQQQQQQQQMQSSSSSENLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLMTHI 150
            .|.:|.:..:.|.|.|                               ||.|.|:|..||....|.
  Rat   318 QPVEQVNTLAGQAQFQ-------------------------------CPQCKKSFLYKSHFTLHW 351

  Fly   151 RNHSAERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPF 215
            |:|:.||.|.|..|:|.|.|.::||.|.|:||.::||.|..|||.|...:.|..|.|:||.|:|:
  Rat   352 RSHTGERPFKCNLCNKAFLQPSDLRVHRRVHTGEKPYSCEVCGKEFAHGSTLQGHSRVHTKEKPY 416

  Fly   216 VCNEPECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAH 267
            ||.  .||:.|:...||..|.:.|..::.|.|..|||.|.|..:..:|::.|
  Rat   417 VCE--NCGQCFSHKGNLTVHFRIHCGLRPYICKKCNKAFRQQGTWKRHMKTH 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 56/144 (39%)
C2H2 Zn finger 133..153 CDD:275368 9/19 (47%)
zf-H2C2_2 145..170 CDD:290200 10/24 (42%)
C2H2 Zn finger 161..181 CDD:275368 9/19 (47%)
zf-H2C2_2 173..198 CDD:290200 13/24 (54%)
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
C2H2 Zn finger 217..239 CDD:275368 7/21 (33%)
zf-H2C2_2 231..256 CDD:290200 10/24 (42%)
C2H2 Zn finger 247..267 CDD:275368 7/19 (37%)
C2H2 Zn finger 275..296 CDD:275368
C2H2 Zn finger 304..324 CDD:275368
C2H2 Zn finger 331..351 CDD:275368
C2H2 Zn finger 359..380 CDD:275368
Zscan5bXP_218239.6 SCAN 33..112 CDD:153421
COG5048 <261..>432 CDD:227381 60/211 (28%)
C2H2 Zn finger 334..354 CDD:275368 9/19 (47%)
SFP1 <356..411 CDD:227516 24/54 (44%)
C2H2 Zn finger 362..382 CDD:275368 9/19 (47%)
zf-H2C2_2 374..399 CDD:404364 13/24 (54%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
zf-C2H2 416..438 CDD:395048 8/23 (35%)
C2H2 Zn finger 418..438 CDD:275368 7/21 (33%)
zf-C2H2 444..466 CDD:395048 8/21 (38%)
C2H2 Zn finger 446..466 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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