DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32772 and Zkscan17

DIOPT Version :9

Sequence 1:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_766529.3 Gene:Zkscan17 / 268417 MGIID:2679270 Length:585 Species:Mus musculus


Alignment Length:318 Identity:68/318 - (21%)
Similarity:121/318 - (38%) Gaps:79/318 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 IAQQQQHQNPQQQQHQNSQQQQQQ--------QQQMQSSSSSENLQSQDDSE-DVDLIFNEEGS- 132
            ::..|..|..::::.:..|..:.|        |....:......|:|..|.| .::::.:..|. 
Mouse   299 LSSLQPFQGEERRKWEELQVPELQPCPQVVLSQSPCPAGGDPPALKSSLDQEVTIEIVLSSSGDE 363

  Fly   133 ----CPLCNKTFSRK----SSLMTHIRNHSAE-------RKFVCTYCHKGFTQAANLRNHERIHT 182
                .|.|.:.....    .|:..|..|.|||       :.:||..|.|.|....|...|.|...
Mouse   364 DSQHSPYCTEELRSPPEDLHSVPAHQSNASAEGEVQTSQKSYVCPNCGKIFRWRVNFIRHLRSRR 428

  Fly   183 NDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFVCNEPECGRSFAQVTNLNNHMKSHHKVQQYCC 247
            ..:|::|..||:.|:...:|:.|...|..::|:.|.  .||:||    .||:|:.||.::     
Mouse   429 EQKPHKCSVCGELFSDSEDLDGHLETHEAQKPYRCT--ACGKSF----RLNSHLISHRRI----- 482

  Fly   248 NVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKLQSQLHTHMKTHGLA-----------FP 301
                           |||             |.....::......::|.|..           ..
Mouse   483 ---------------HLQ-------------PASQQPMKKSEEEALETEGTGASDLLEKSKAKLS 519

  Fly   302 YECDKCDEKFLQQAHLDQHLK---MHDEFK-FKCDICPSSFNQESLLKKHVQRHVEGR 355
            ::|..|::.|.:..||.:|.:   :.||.: |:|..|..:|.|...|.:|.:.|::.|
Mouse   520 FQCGDCEKSFQRHDHLVRHRRHCHLKDETRPFQCRYCVKTFRQNYDLLRHERLHMKRR 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 59/263 (22%)
C2H2 Zn finger 133..153 CDD:275368 4/23 (17%)
zf-H2C2_2 145..170 CDD:290200 11/31 (35%)
C2H2 Zn finger 161..181 CDD:275368 7/19 (37%)
zf-H2C2_2 173..198 CDD:290200 8/24 (33%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
C2H2 Zn finger 217..239 CDD:275368 8/21 (38%)
zf-H2C2_2 231..256 CDD:290200 5/24 (21%)
C2H2 Zn finger 247..267 CDD:275368 3/19 (16%)
C2H2 Zn finger 275..296 CDD:275368 1/20 (5%)
C2H2 Zn finger 304..324 CDD:275368 6/22 (27%)
C2H2 Zn finger 331..351 CDD:275368 6/19 (32%)
C2H2 Zn finger 359..380 CDD:275368
Zkscan17NP_766529.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
SCAN 50..124 CDD:396558
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 141..167
KRAB_A-box 221..>249 CDD:413388
COG5048 <337..573 CDD:227381 61/274 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..397 9/38 (24%)
C2H2 Zn finger 407..427 CDD:275368 7/19 (37%)
C2H2 Zn finger 435..455 CDD:275368 6/19 (32%)
C2H2 Zn finger 463..483 CDD:275368 10/45 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..506 6/35 (17%)
C2H2 Zn finger 522..543 CDD:275368 6/20 (30%)
C2H2 Zn finger 553..573 CDD:275368 6/19 (32%)
Nuclear localization signal 575..579 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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