DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32772 and Zscan12

DIOPT Version :9

Sequence 1:NP_001284870.1 Gene:CG32772 / 31420 FlyBaseID:FBgn0052772 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_038952124.1 Gene:Zscan12 / 266716 RGDID:628738 Length:503 Species:Rattus norvegicus


Alignment Length:353 Identity:110/353 - (31%)
Similarity:168/353 - (47%) Gaps:38/353 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VAASASAAVAASAAAAATSSSTASSSDSDAIAQQQ-------QHQNPQQQQHQNSQQQQQQQQQM 105
            |.|.....:|...|.....|...:.::|..:..:|       ..|||..:..:::.:.::.:...
  Rat   166 VKAKPGCELADGEAQEEQVSGIETGNESRNVTLKQGLWEGMEAEQNPSSRLAKDTLKCEETRDPR 230

  Fly   106 QSSS--SSENLQSQDDSEDVDLIFNEEGS-------------CPLCNKTFSRKSSLMTHIRNHSA 155
            :.||  |.|:.|...:...|:|..|...:             |..|.||||:.|.|:.|.|.|:.
  Rat   231 EESSGISREDSQPLRNENVVNLTENSNHAELQNICPGRKVHGCDECGKTFSQHSRLIEHRRIHTG 295

  Fly   156 ERKFVCTYCHKGFTQAANLRNHERIHTNDRPYQCVDCGKTFTQITNLNNHRRLHTGERPFVCNEP 220
            :|.:.|..|.|.|.....|..|:.:||.::||:|.:||:.|.|.:.||.|:|||:||:.:.||  
  Rat   296 DRPYRCEECGKTFRWRTVLIRHKVVHTGEKPYKCNECGRAFGQWSALNQHQRLHSGEKHYHCN-- 358

  Fly   221 ECGRSFAQVTNLNNHMKSHHKVQQYCCNVCNKKFTQVTSLNQHLQAHAGVTGYYCPRCPEKNFKL 285
            |||::|.|...|.:|:|||.:.:.|.|..|||.|.:.::|:||...|.|...|.|..| .:.|..
  Rat   359 ECGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKSFNRRSTLSQHQGVHTGTKPYECSDC-GRAFVY 422

  Fly   286 QSQLHTHMKTHGLAFPYECDKCDEKFLQQAHLDQHLKMH-DEFKFKCDICPSSFNQESLLKKHVQ 349
            .|.|.||.:||.          .||...|:...|..|.| .|..:||.||..:|.|::.|.:|.|
  Rat   423 NSSLATHQETHH----------KEKLFTQSGPSQQRKNHTSEKSYKCSICGKTFVQKTSLIEHEQ 477

  Fly   350 RHVEGRYLSCPVANCAESFAVRQHLSKH 377
            .|.|.|...|  |...::|.....|::|
  Rat   478 IHTEERPYKC--AEGGKAFIQVSDLTEH 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32772NP_001284870.1 COG5048 <124..378 CDD:227381 94/268 (35%)
C2H2 Zn finger 133..153 CDD:275368 10/19 (53%)
zf-H2C2_2 145..170 CDD:290200 9/24 (38%)
C2H2 Zn finger 161..181 CDD:275368 6/19 (32%)
zf-H2C2_2 173..198 CDD:290200 10/24 (42%)
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
C2H2 Zn finger 217..239 CDD:275368 10/21 (48%)
zf-H2C2_2 231..256 CDD:290200 11/24 (46%)
C2H2 Zn finger 247..267 CDD:275368 8/19 (42%)
C2H2 Zn finger 275..296 CDD:275368 7/20 (35%)
C2H2 Zn finger 304..324 CDD:275368 5/19 (26%)
C2H2 Zn finger 331..351 CDD:275368 8/19 (42%)
C2H2 Zn finger 359..380 CDD:275368 5/19 (26%)
Zscan12XP_038952124.1 SCAN 43..155 CDD:128708
COG5048 <209..429 CDD:227381 75/222 (34%)
C2H2 Zn finger 273..293 CDD:275368 10/19 (53%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)
C2H2 Zn finger 329..349 CDD:275368 9/19 (47%)
C2H2 Zn finger 357..377 CDD:275368 10/21 (48%)
C2H2 Zn finger 385..405 CDD:275368 8/19 (42%)
C2H2 Zn finger 413..451 CDD:275368 14/48 (29%)
zf-C2H2 457..479 CDD:395048 9/21 (43%)
C2H2 Zn finger 459..479 CDD:275368 8/19 (42%)
C2H2 Zn finger 487..503 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23226
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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