DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6927 and glra2

DIOPT Version :9

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001161371.1 Gene:glra2 / 793646 ZFINID:ZDB-GENE-090407-1 Length:448 Species:Danio rerio


Alignment Length:526 Identity:148/526 - (28%)
Similarity:244/526 - (46%) Gaps:112/526 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IISILLNCL-----YASASALDEDCPTLDDGDSLSQTQLLDRL---THGCRYDRLERPITYSETG 62
            :::.||.||     :..:|..|.|  .|....|:|.:..||:|   |.|  ||...||     ..
Zfish     8 LLTTLLACLMEMLNFRVSSGKDPD--LLSSSSSMSPSDFLDKLMGRTSG--YDARIRP-----NF 63

  Fly    63 QRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLW 127
            :..||:|....:|....::....:.:::...|:.::.||||.:... |.....:  :..:.:|:|
Zfish    64 KGPPVNVTCNIFINSFGSVTETTMDYRVNIFLRQKWNDPRLAYSEY-PDSSLDL--DPSMLDSIW 125

  Fly   128 MPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESW 192
            .|.:|.|||:.::...:|..:.|..|..||||:.|.|:...|.|.::||.||.|.|.|:..|||:
Zfish   126 KPDLFFANEKGANFHDVTTDNKLLRIFKDGTVLYSIRLTLILSCPMDLKNFPMDVQTCTMQLESF 190

  Fly   193 MYNTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYSSLSFT--- 254
            .|..::|:..|..|.|:.....|.|.:|:::           |..||  |....:|::..||   
Zfish   191 GYTMNDLIFEWLDKGPVQVADGLTLPQFLIR-----------DEKDL--GYCTKHYNTGKFTCIE 242

  Fly   255 --VHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPK 317
              .||.|.:|:||:..::||:|||.:||||||:..|.||.|:.||.:|:||..|.:|....:|||
Zfish   243 VKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRASLPK 307

  Fly   318 VSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHAR 382
            |||:|..::|...|.:|:|.:::|:|.||.:.|::|..    |..|.           |:|...:
Zfish   308 VSYVKAIDIWMAVCLLFVFAALLEYAGVNFVSRQQKEF----LRLKR-----------RQRRTQK 357

  Fly   383 SRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGS 447
            ........||            |::|.|.    |.:|:|.|:...:.:::.|.            
Zfish   358 EEDLQDGRLH------------FSSYNTT----TCVKDGAVVKNTQVNQIQQP------------ 394

  Fly   448 MGSAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLV 512
                      |...:::|    ||.:..                 :.|..||:.:|..|||:||:
Zfish   395 ----------SILKNTET----NRKKFV-----------------DRAKRIDTISRAAFPLAFLI 428

  Fly   513 FNLFFW 518
            ||:|:|
Zfish   429 FNVFYW 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:273305 148/526 (28%)
Neur_chan_LBD 36..259 CDD:280998 64/230 (28%)
Neur_chan_memb 270..518 CDD:280999 69/247 (28%)
glra2NP_001161371.1 LIC 44..437 CDD:273305 138/488 (28%)
Neur_chan_LBD 45..251 CDD:280998 65/228 (29%)
Neur_chan_memb 258..434 CDD:280999 69/249 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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