Protein Alignment CG6927 and gabrr3a

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001122232.1
• Gene: gabrr3a / 570876
• ZFINID: ZDB-GENE-080722-20
• Length: 472
• Species: Danio rerio
• Alignment Length: 474
• Identity: 113/474 - (23%)
• Similarity: 203/474 - (42%)
• Gaps: 100/474 - (21%)

  Fly    62 GQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSL 126
            |..:||.:.::  :..:..:...::.|.:...|:..:.|.||.|.:.:.|.|   ..:..|...:
Zfish    86 GSAIPVGIDVQ--VESIDGISEVNMDFTMTLYLRHYWQDDRLAFPSSNNKSR---TFDARLVKKI 145

  Fly   127 WMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLES 191
            |:|.:|..:.:.|.|...|.::|:..:.|||.::.|.||..|..|.::..:||.|.|:||..|||
Zfish   146 WVPDVFFVHSKRSFIHDTTMENIMLRVFPDGNILYSVRITVTALCSMDFSRFPLDTQNCSLELES 210

  Fly   192 WMYNTSELVLHWEQKRPITYDGALHLTEFVLQR---SWSNETVINADLSDLRHGAFAGNYSSLSF 253
            :.||.::|:|:|:..........:.|::|.::.   |:.           |...:..|.|:.|..
Zfish   211 YAYNENDLMLYWKNGNDSLRTDEIALSQFFIEEFHPSYG-----------LAFYSSTGWYNRLYI 264

  Fly   254 TVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKV 318
            ...|.|.:.|:::..:.|:||:|.:||||||:.....|.|::||.:|:||..|:.:....::|:|
Zfish   265 NFILRRHIFFFMLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITGVSASMPQV 329

  Fly   319 SYIKVSEVWFLGCTIFIFGSMVEFAFVN--TIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHA 381
            ||:|..:::.....:|:|.|::|:|.||  |.....|.:...||.:.:              ...
Zfish   330 SYVKAVDIYLWASFLFVFLSVIEYAAVNYFTTVEEMKKLQKGKLPASY--------------DAT 380

  Fly   382 RSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFG 446
            ::.::.| ..|...|.                                             |.|.
Zfish   381 QAMAYDG-CFHDDIDA---------------------------------------------SPFP 399

  Fly   447 SMGSAQSTGAISAASSSQTL------TNNNRTESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFV 505
            .:.:..||.....|.:|.|.      |...|..|.|......:|.         :..|||.:|.:
Zfish   400 ELPTTPSTTRTIPARASSTEPPPTEGTRLWRKRSVGKNIRFIMSN---------SYMIDSYSRIL 455

  Fly   506 FPLSFLVFNLFFWTFVYCI 524
            |||::|:||:.:|    ||
Zfish   456 FPLAYLLFNIIYW----CI 470

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	111/468 (24%)
		Neur_chan_LBD	36..259	CDD:280998	49/199 (25%)
		Neur_chan_memb	270..518	CDD:280999	59/255 (23%)
gabrr3a	NP_001122232.1	LIC	67..471	CDD:273305	113/474 (24%)
		LGIC_ECD	88..272	CDD:355788	49/199 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810