Protein Alignment CG6927 and gabrr1

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001020724.1
• Gene: gabrr1 / 568984
• ZFINID: ZDB-GENE-040724-212
• Length: 466
• Species: Danio rerio
• Alignment Length: 492
• Identity: 121/492 - (24%)
• Similarity: 214/492 - (43%)
• Gaps: 102/492 - (20%)

  Fly    50 DRLERPITYSET----------------GQRLP--VDVYMRAYIYFMQNLEAHDLQFKIYALLQM 96
            |..:.|:|.||.                |..:|  |||.:.:    :..:...|:.|.:...|:.
Zfish    51 DVTKAPVTKSEQLLKLDDHDFTMRPGFGGPAIPVGVDVQLES----LDTISEVDMDFTMTLYLRH 111

  Fly    97 RYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIV 161
            .:.|.||:|.:   ...|.:..:..|...:|:|.||..:.:.|.|...|.::::..:.|||.|:.
Zfish   112 YWKDARLSFPS---NTNQSMTFDGRLVKKIWVPDIFFVHSKRSFIHDTTTENVMLRVHPDGKVLY 173

  Fly   162 SNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWEQ-KRPITYDGALHLTEFVLQRS 225
            |.|:..|..|.::|..||.|.|.||..:||:.|...:|:|:|:: .:.:..|..:.|::|::|..
Zfish   174 SLRVTVTSMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKRGNKSLQTDDKISLSQFLIQEF 238

  Fly   226 WSNETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQA 290
            .:.        :.|...:..|.|:.|.....|.|.:.|:|:..:.|:.|:|.:||||||:.....
Zfish   239 HTT--------TKLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAV 295

  Fly   291 PPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVN---TIWRRK 352
            |.|:.||.:|:||..|:.:....::|:|||||..:::.....:|:|.|::|:|.||   |:..||
Zfish   296 PARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERK 360

  Fly   353 KSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITT 417
            :    :..||:. |..|..      .:|......|.:  :...|..:.|..|.:.       ::.
Zfish   361 E----RSQNSRQ-LPCTCG------MTHPGQMMMSSS--YSEMDMMTTGNYGMSE-------LSD 405

  Fly   418 IKEGQVLDQQRTSRVVQKMDVNFVESAFGSMGSAQSTGAISAASSSQTLTNNNRTESAGHQEEID 482
            .|:.|.|                |.....:...||.    .|.::|.||             .||
Zfish   406 TKQEQFL----------------VHLVMDNEQGAQR----PAVTTSSTL-------------NID 437

  Fly   483 LSGWTTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWT 519
            ...            ||..:|.:||.::.:||:.:|:
Zfish   438 THA------------IDKYSRVIFPGAYTLFNIIYWS 462

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	121/492 (25%)
		Neur_chan_LBD	36..259	CDD:280998	56/227 (25%)
		Neur_chan_memb	270..518	CDD:280999	61/250 (24%)
gabrr1	NP_001020724.1	LIC	44..464	CDD:273305	121/492 (25%)
		LGIC_ECD	81..266	CDD:355788	51/199 (26%)
		Cys-loop	183..197	CDD:349787	6/13 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810