Protein Alignment CG6927 and gabra4

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001017822.1
• Gene: gabra4 / 550520
• ZFINID: ZDB-GENE-050417-360
• Length: 557
• Species: Danio rerio
• Alignment Length: 563
• Identity: 134/563 - (23%)
• Similarity: 233/563 - (41%)
• Gaps: 142/563 - (25%)

  Fly    37 TQLLDRLTHGCRYDRLER-----PITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQM 96
            |::||||..|  ||...|     |:|..:|      |:|:.::    ..:...::::.:....:.
Zfish    49 TRILDRLLDG--YDNRLRPGFGGPVTEVKT------DIYVTSF----GPVSDVEMEYTMDVFFRQ 101

  Fly    97 RYLDPRLNFRNVSPKRRQPILGEEHLR-NSL-----WMPHIFLANERDSSILGLTEKDILTSISP 155
            .::|.||.:..       |:   |.|| |:|     |.|..|..|.:.|....:|..:.|..|..
Zfish   102 TWVDRRLRYEG-------PV---EILRLNNLMVTKVWTPDTFFRNGKRSVAHNMTAPNRLFRIMK 156

  Fly   156 DGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHW------------EQKRP 208
            :||::.:.|:..:..|.:.|..||.|...|.....|:.|..:|::..|            |....
Zfish   157 NGTILYTMRLTISAECPMRLVNFPMDGHSCPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSL 221

  Fly   209 ITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSM 273
            :.||        ::.::.|:|||          .:..|.|..::...||.|.:|::::..::|.:
Zfish   222 VQYD--------LIGQTVSSETV----------KSITGEYVVMTVYFHLKRKMGYFMIQTYIPCI 268

  Fly   274 LIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLG-CTIFIFG 337
            :.|.:|.||||:..:..|.|...|.:|:||..||:.:...:||||||....: ||:. |..|:|.
Zfish   269 MTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMD-WFIAVCFAFVFS 332

  Fly   338 SMVEFAFVNTIW-------RRK----------KSVPVKKLNSKHILKSTLSPN-LLRRRSHARSR 384
            :::|||.||...       :||          ||...|..:::.:|:.....| .||:|.::..:
Zfish   333 ALIEFAAVNYFTNAQAERAKRKQAKAAAAASVKSSTGKNKDTEEVLQQNSDTNGNLRKRVNSNIQ 397

  Fly   385 SFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGSMG 449
            ..:.:...:..:..|..||. ::..|:....::..||       ||....       :|......
Zfish   398 PQAESKKTQRTEASSKSGAS-SSKPTLTSQSSSTSEG-------TSSFSS-------QSRLSPSS 447

  Fly   450 SAQSTGAISAASSSQT----------------------------------LTNNNRTES-AGHQE 479
            ::||..|.|::|:|:|                                  |.|..:.|: |..|.
Zfish   448 ASQSNAAASSSSASKTTPPAPPSTPTVPDKPSPGTTPAGSAPLHHLLGPKLENIKKKEAKAQPQP 512

  Fly   480 EIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTFVY 522
            ....:|.        |..||..||.:||:||..||:.:|. ||
Zfish   513 AAPATGG--------ASKIDEYARILFPVSFGAFNMVYWV-VY 546

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	132/559 (24%)
		Neur_chan_LBD	36..259	CDD:280998	55/244 (23%)
		Neur_chan_memb	270..518	CDD:280999	74/301 (25%)
gabra4	NP_001017822.1	Neur_chan_LBD	49..256	CDD:280998	56/246 (23%)
		Neur_chan_memb	263..543	CDD:280999	74/303 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900