Sequence 1: | NP_572194.1 | Gene: | CG6927 / 31419 | FlyBaseID: | FBgn0029733 | Length: | 524 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262916.1 | Gene: | nAChRalpha1 / 42918 | FlyBaseID: | FBgn0000036 | Length: | 597 | Species: | Drosophila melanogaster |
Alignment Length: | 613 | Identity: | 131/613 - (21%) |
---|---|---|---|
Similarity: | 206/613 - (33%) | Gaps: | 186/613 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 LIISILLNCLYASASALDEDCPTLDDGDSLSQTQLLDRLTHGCRYDRLERPITYSETGQRLPVDV 69
Fly 70 YMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPI----LGEEHLRNSLWMPH 130
Fly 131 IFLANERDSSILGLTEKDILTS--ISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWM 193
Fly 194 YNTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSD--------------LRHGAF 244
Fly 245 AG----NYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLT-- 303
Fly 304 --FITLAS----------AQGK---------TLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVN- 346
Fly 347 -----TIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHA----------RSRSFSG-------T 389
Fly 390 ALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGSMGSAQST 454
Fly 455 GAISAASSSQT----------------------LTNNNRTESAGHQEEIDLSGWTTLTPQEIAMW 497
Fly 498 IDSRARFVFPLSFLVFNLFFWTF-VYCI 524 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6927 | NP_572194.1 | LIC | 3..520 | CDD:273305 | 129/606 (21%) |
Neur_chan_LBD | 36..259 | CDD:280998 | 52/246 (21%) | ||
Neur_chan_memb | 270..518 | CDD:280999 | 65/315 (21%) | ||
nAChRalpha1 | NP_001262916.1 | Neur_chan_LBD | 25..240 | CDD:280998 | 58/259 (22%) |
LIC | 27..530 | CDD:273305 | 128/591 (22%) | ||
Neur_chan_memb | 247..530 | CDD:280999 | 68/326 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447287 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |