Protein Alignment CG6927 and Grd

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_524131.1
• Gene: Grd / 39984
• FlyBaseID: FBgn0001134
• Length: 686
• Species: Drosophila melanogaster
• Alignment Length: 665
• Identity: 143/665 - (21%)
• Similarity: 241/665 - (36%)
• Gaps: 185/665 - (27%)

  Fly     3 WSLIIS--ILLNCLYASA--------------------------------SALDEDCPT---LDD 30
            :.|:||  :|:.|:|.:|                                ::|....|:   ...
  Fly    39 FKLLISCCLLMLCIYPNAWPWSIGPGSGPFSVSADSIKGRGDTHRLGEMGTSLSSSLPSSWLTQS 103

  Fly    31 GDSLSQTQLLDRLTHGCRYDRLERPITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQ 95
            .:..:.::|||.|..|  ||...|| .:......:.||:.:|:    |..:...|:.:.:....:
  Fly   104 NNHANISELLDNLLRG--YDNSIRP-DFGGPPATIEVDIMVRS----MGPISEVDMTYSMDCYFR 161

  Fly    96 MRYLDPRLNFR--------NVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTS 152
            ..::|.||.|.        :||...|            :|.|..:..|.:.|.:..:|..:....
  Fly   162 QSWVDKRLAFEGAQDTLALSVSMLAR------------IWKPDTYFYNGKQSYLHTITTPNKFVR 214

  Fly   153 ISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWEQKRP---ITYDGA 214
            |..:|.|:.|:|:.....|.:||..||.|.|.|.....|:.|.||:::..|.::||   |..|..
  Fly   215 IYQNGRVLYSSRLTIKAGCPMNLADFPMDIQKCPLKFGSFGYTTSDVIYRWNKERPPVAIAEDMK 279

  Fly   215 L-----------HLTEFVL--------QRSWSNE----------TVINADLSDLRH--------- 241
            |           :||:.|.        :|.::|:          |......:..:|
  Fly   280 LSQFDLVDCPAGNLTDIVYKAAAPRPQRRPFNNKDPPRPTSKVMTTFAGPAAKNQHVRGTGLKLD 344

  Fly   242 -GAFA--------------------------GNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAIS 279
             |||.                          ..||.|....||.|.:|.:|:..:.|..|:|.:|
  Fly   345 KGAFGTGRDATGGSGSTTGLSGTITLETNHPSEYSMLMVNFHLQRHMGNFLIQVYGPCCLLVVLS 409

  Fly   280 WVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAF 344
            ||||||..:....|::||.:|:||...|.......||||||....:.:......|||.::::||.
  Fly   410 WVSFWLNREATADRVSLGITTVLTMTFLGLEARTDLPKVSYPTALDFFVFLSFGFIFATILQFAV 474

  Fly   345 VNTIWRRKKS---VPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFN 406
            |:...:....   ..:::|:|:. .:|...|.....|....|:.:....|...|
  Fly   475 VHYYTKYGSGECYFIIEELDSES-GESETEPLTSDFRGSTESKIYEVIPLSMCA----------- 527

  Fly   407 NYLTVNLPITTIKEGQVLDQQRTSR--------------------------------VVQKMDVN 439
                :::|....:.|.:..:.|..|                                ..::..:.
  Fly   528 ----ISMPPPPTRLGMLTSRNRRPRNRRHGLWSMKLLGLFDWRRRRKPPRADSDEDEDDEQTQLR 588

  Fly   440 FVESAFGSMGSAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQ-EIAMWIDSRAR 503
            ..|:...|..:|.:..|..||..|.. |...|..|...:||::.......||| .....||..:|
  Fly   589 ANEAPTTSAAAAAAQAAAQAARISPP-TGGRRRMSYYRREEMEARRKGKRTPQYNSVSKIDRASR 652

  Fly   504 FVFPLSFLVFNLFFW 518
            .||||.|::.|:|:|
  Fly   653 IVFPLLFILINVFYW 667

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	143/665 (22%)
		Neur_chan_LBD	36..259	CDD:280998	64/298 (21%)
		Neur_chan_memb	270..518	CDD:280999	66/283 (23%)
Grd	NP_524131.1	Neur_chan_LBD	110..326	CDD:280998	55/234 (24%)
		LIC	111..670	CDD:273305	134/593 (23%)
		Neur_chan_memb	398..667	CDD:280999	66/285 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45447284
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.840