DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6927 and pHCl-1

DIOPT Version :10

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001261898.1 Gene:pHCl-1 / 39730 FlyBaseID:FBgn0264908 Length:978 Species:Drosophila melanogaster


Alignment Length:504 Identity:119/504 - (23%)
Similarity:195/504 - (38%) Gaps:119/504 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SILLNCLY----ASASALDEDCPTLDD-----------GDSLSQTQLLDRLTHGCRYDR------ 51
            |:||...|    ::|:|...:...||.           .:|.|..::||.|....|||:      
  Fly   294 SVLLMLCYLTTASTAAATQSETGALDKHPIHGIDWSKFDESSSDKEILDLLLEKKRYDKRLLPPV 358

  Fly    52 --------LERPITYSETGQRLP-----VDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRL 103
                    |:.|...:....|.|     :.|.:...:..:.:.:...|::::..||..::.||||
  Fly   359 NDEDFCCGLQSPDMATNQNARRPHNRGTLTVNVNVLLLSLASPDESSLKYEVEFLLNQQWNDPRL 423

  Fly   104 NFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKD------ILTSISPDGTVIVS 162
            .:.|   |.....|...|..:|:|.|..:.....|.       ||      ....|..:||:..:
  Fly   424 QYGN---KSHYDFLNALHHHDSIWTPDTYFIMHGDF-------KDPIIPMHFALRIFRNGTITYA 478

  Fly   163 NRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRSWS 227
            .|....|.|..:|..||||:..||..:||..|..:::...|:.            .|..|::|.|
  Fly   479 MRRHLILSCQGSLHIFPFDDPKCSFSMESISYEEAQIKYVWKN------------DEDTLRKSPS 531

  Fly   228 ----NETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQAD 288
                |..:|....:.....::.||||.|...:..||...:|....|:|.:::|..|:::|||:.:
  Fly   532 LTTLNAYLIKNQTTACDQNSWRGNYSCLQVELTFTRDRAYYFTTVFIPGIILVTSSFITFWLEWN 596

  Fly   289 QAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKK 353
            ..|.|:.:|.:|:|.|.|.::....|||.||.:....||...|..||:.|::||..||.:.|:: 
  Fly   597 AVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVCVNYVGRKR- 660

  Fly   354 SVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTI 418
              |:.              |::.|..                          .|.:|..||....
  Fly   661 --PLH--------------NVVYRPG--------------------------ENPVTQRLPAVLS 683

  Fly   419 KEGQVLDQQRTSRVVQKMDVNFVESAFGSMGSA--QSTGAISAASSSQT 465
            :.|.:|.....|..        ...|...||.|  .|:|..:|:||..|
  Fly   684 RIGVILASPLASAA--------ATPAMSMMGGATPMSSGTPAASSSVAT 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:455710 119/504 (24%)
pHCl-1NP_001261898.1 LIC 339..>662 CDD:455710 89/347 (26%)
LGIC_TM <948..975 CDD:476813
TM4 helix 950..971 CDD:349850
Blue background indicates that the domain is not in the aligned region.

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