Protein Alignment CG6927 and gabra6a

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_005173169.1
• Gene: gabra6a / 393704
• ZFINID: ZDB-GENE-040426-1692
• Length: 435
• Species: Danio rerio
• Alignment Length: 512
• Identity: 119/512 - (23%)
• Similarity: 199/512 - (38%)
• Gaps: 143/512 - (27%)

  Fly    37 TQLLDRLTHGCRYDRLERP---ITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRY 98
            |::||.|..|  ||...||   ::.:|    :..|:::.::    ..:...:::|.:....:..:
Zfish    28 TRILDGLLEG--YDNRLRPGSGVSVTE----VKTDIFVTSF----GPVSDVNMEFTMDMFFRQMW 82

  Fly    99 LDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSN 163
            :|.||.|:  .|....|:  ...:.:.:|.|..|..|.|.|....:|..:.|..|..:|||..:.
Zfish    83 VDERLAFQ--GPIEILPL--NNRMVDKIWTPDTFFRNARKSLAHNMTSPNKLFRIMQNGTVFYTM 143

  Fly   164 RIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHW------------EQKRPITYDGALH 216
            |:..:..|.:.|:.||.|...|.....|:.|...|:|..|            |....:.||
Zfish   144 RLTVSAVCPMVLRDFPMDGHTCPLYFGSYAYTNREIVYTWRKGLEASVDFPPESSSLLQYD---- 204

  Fly   217 LTEFVLQRSWSNETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWV 281
                :|.::...||          :....|.||......:|.|.:|::|:..::|.:::|.:|.|
Zfish   205 ----LLGQTLFTET----------YKFSTGLYSVQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQV 255

  Fly   282 SFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLG-CTIFIFGSMVEFAFV 345
            |||:..:..|.|...|.:|:||..||:.:...:||||||....: ||:. |..|:..::||||.|
Zfish   256 SFWINKESVPARTVAGITTVLTMTTLSISARSSLPKVSYATAMD-WFIAVCFAFVASALVEFAAV 319

  Fly   346 NTIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLT 410
            |                   ..:||..|   |.:|
Zfish   320 N-------------------YYATLEAN---RENH------------------------------ 332

  Fly   411 VNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGSMGSAQS----TGAISAASSSQTLTNNNR 471
             .||..:|.|.|                     |.||....:|    |.|.|.......::...|
Zfish   333 -KLPRGSIVESQ---------------------AQGSDDEPESPQSDTSAYSRKRRGYPVSEAPR 375

  Fly   472 T------ESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTFVY 522
            |      :.:.....:.|:|.:.         ||..:|.:|||:|.:|||.:| ::|
Zfish   376 TRVPIFLQGSAFPPNMMLAGTSA---------IDKYSRILFPLAFGIFNLVYW-YIY 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	118/508 (23%)
		Neur_chan_LBD	36..259	CDD:280998	52/236 (22%)
		Neur_chan_memb	270..518	CDD:280999	62/258 (24%)
gabra6a	XP_005173169.1	LIC	2..422	CDD:273305	118/510 (23%)
		Neur_chan_LBD	28..234	CDD:280998	52/237 (22%)
		Neur_chan_memb	242..419	CDD:280999	62/260 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900