Sequence 1: | NP_572194.1 | Gene: | CG6927 / 31419 | FlyBaseID: | FBgn0029733 | Length: | 524 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523927.2 | Gene: | nAChRbeta1 / 38545 | FlyBaseID: | FBgn0000038 | Length: | 521 | Species: | Drosophila melanogaster |
Alignment Length: | 559 | Identity: | 128/559 - (22%) |
---|---|---|---|
Similarity: | 222/559 - (39%) | Gaps: | 125/559 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 WSLIISILLNCLYASASALDEDCPTLDDGDSLSQTQLLDRLTHGCRYDRLERPITYSETGQRLPV 67
Fly 68 DVYMRAYIYFMQ--NLEAHDLQFKIYALLQMRYLDPRL-----NFRNVSPKRRQPILGEEHLRNS 125
Fly 126 LWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLY---CWLNLKKFPFDEQHCST 187
Fly 188 VLESWMYNTSELVLHWEQKRPITYDGALHLTE-FV-LQRSWSNET--------VINADLSDLRHG 242
Fly 243 AFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITL 307
Fly 308 ASAQGKTLPKVSYI-----KVSEVWFLGCTIFIFGSMVEFAFVNTIWR--RKKSVP--VKKLNSK 363
Fly 364 HILKSTLSPNLLRRRSHARSR---SFSGTAL--HKTADTGSLGGAGFNNYLTVNLP--ITTIKEG 421
Fly 422 QVLDQQRTSRVVQKMD-------VNFVESAFGSMGSAQSTGAISAASSSQTLT--NNNRTES--- 474
Fly 475 -AGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLV 512 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6927 | NP_572194.1 | LIC | 3..520 | CDD:273305 | 128/559 (23%) |
Neur_chan_LBD | 36..259 | CDD:280998 | 53/242 (22%) | ||
Neur_chan_memb | 270..518 | CDD:280999 | 65/272 (24%) | ||
nAChRbeta1 | NP_523927.2 | LIC | 8..500 | CDD:273305 | 128/559 (23%) |
Neur_chan_LBD | 28..236 | CDD:280998 | 54/244 (22%) | ||
Neur_chan_memb | 243..498 | CDD:280999 | 65/274 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45447281 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18945 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.030 |