Protein Alignment CG6927 and Glra4

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001178843.1
• Gene: Glra4 / 367912
• RGDID: 1564103
• Length: 456
• Species: Rattus norvegicus
• Alignment Length: 547
• Identity: 149/547 - (27%)
• Similarity: 238/547 - (43%)
• Gaps: 143/547 - (26%)

  Fly     3 WSLIISILLNCLYASASALDEDCPTLDDGDS-LSQTQLLDRL---THGCRYDRLERPITYSETGQ 63
            |:|...:||     |.:...||..:...|.. :|.:..||:|   |.|  ||...||     ..:
  Rat    14 WTLPGKVLL-----SVALAKEDVKSGPKGSQPMSPSDFLDKLMGRTSG--YDARIRP-----NFK 66

  Fly    64 RLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFR-------NVSPKRRQPILGEEH 121
            ..||:|....:|....::....:.:::...|:.::.||||.:|       ::.|.
  Rat    67 GPPVNVTCNIFINSFGSVTETTMDYRVNVFLRQQWNDPRLAYREYPDDSLDLDPS---------- 121

  Fly   122 LRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCS 186
            :.:|:|.|.:|.|||:.::...:|..:.|..|..:|.|:.|.|:...|.|.::||.||.|.|.|:
  Rat   122 MLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNVLYSIRLTLILSCPMDLKNFPMDIQTCT 186

  Fly   187 TVLESWMYNTSELVLHWEQKRP-ITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYSS 250
            ..|||:.|..::|:..|.:..| :.....|.|.:|:|:           |..||  |....:|::
  Rat   187 MQLESFGYTMNDLMFEWLEDAPAVQVAEGLTLPQFILR-----------DEKDL--GYCTKHYNT 238

  Fly   251 LSFT-----VHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASA 310
            ..||     .||.|.:|:||:..::||:|||.:||||||:..|.||.|:.||.:|:||..|.:|.
  Rat   239 GKFTCIEVKFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVGLGITTVLTMTTQSSG 303

  Fly   311 QGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLL 375
            ...:||||||:|..::|...|.:|:|.:::|:|.||.:.|:.|.  ..:|..|
  Rat   304 SRASLPKVSYVKAIDIWMAVCLLFVFAALLEYAAVNFVSRQHKE--FMRLRRK------------ 354

  Fly   376 RRRSHARSR-------SFSGTAL-H--KTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTS 430
            :||.|....       .|.|..| |  :..|.|.:.|   ::..:...|.|.:|||:.:.:....
  Rat   355 QRRRHMEEDIIREGRFYFRGYGLGHCLQARDGGPMEG---SSIYSPQPPTTLLKEGETMRKVYVD 416

  Fly   431 RVVQKMDVNFVESAFGSMGSAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIA 495
            |                                                               |
  Rat   417 R---------------------------------------------------------------A 418

  Fly   496 MWIDSRARFVFPLSFLVFNLFFWTFVY 522
            ..||:.:|.|||.:|||||:|:|. ||
  Rat   419 KRIDTISRAVFPFTFLVFNIFYWV-VY 444

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	147/543 (27%)
		Neur_chan_LBD	36..259	CDD:280998	63/238 (26%)
		Neur_chan_memb	270..518	CDD:280999	70/257 (27%)
Glra4	NP_001178843.1	LIC	9..444	CDD:273305	147/545 (27%)
		Neur_chan_LBD	47..254	CDD:280998	64/236 (27%)
		Neur_chan_memb	261..441	CDD:280999	70/259 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910