DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6927 and CG12344

DIOPT Version :9

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001286298.1 Gene:CG12344 / 36145 FlyBaseID:FBgn0033558 Length:449 Species:Drosophila melanogaster


Alignment Length:475 Identity:111/475 - (23%)
Similarity:196/475 - (41%) Gaps:112/475 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLN-----FRNVSPKRRQPILGEEHLR-- 123
            ||.|....::..:.::...|:.|::...:..|:|:.||.     |..          |::::.  
  Fly    57 PVIVDFSIFVVDINSINVEDMDFRVDMFIHQRWLESRLEIPDDIFEE----------GDDYVTLL 111

  Fly   124 ----NSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQH 184
                .:.|.|..:..|.:.:.|..||.|....::..:.||..:.|:.|.:.|.:..:.:|.|.|.
  Fly   112 PEVFENFWQPDPYFLNSKIAEIATLTHKFTSVTLYKNKTVRYAARMHAIIACQMEFQLYPMDIQV 176

  Fly   185 CSTVLESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYS 249
            |...:||:..|..::.|.|... .:|.:..|.|.::.|.:.      :..:.||.......||:|
  Fly   177 CPIYIESFSSNNQKVKLRWSDS-GVTLNPELKLLQYNLGQP------LELEESDGYMPEKVGNFS 234

  Fly   250 SLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKT 314
            .|:......|.:|.:|:..|.||.|:|.:||.||||..|..|.|:||..:.:||.:|:.:  |..
  Fly   235 RLTVYFRFERQIGHHLIQTFAPSSLVVMLSWFSFWLGLDAIPGRVTLLVTCMLTLVTMFT--GAD 297

  Fly   315 LPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRS 379
            :|.|:|:|..::|..||.:.:|.::.||            |.||.|:.::..:....|.:|..| 
  Fly   298 IPPVAYVKALDLWMAGCMLSVFAALAEF------------VVVKVLDVQYQYQVNRIPKVLPMR- 349

  Fly   380 HARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESA 444
                                               |:.:::||.                     
  Fly   350 -----------------------------------ISNMEKGQC--------------------- 358

  Fly   445 FGSMGSAQSTGAISAASSSQTLTNNNRTESAGH--------QEEIDLSGWT-TLTPQEIAMW--I 498
             .::.|.:. ||:.:..::||.|...:|...|:        ::.:....|| |.|..|..||  |
  Fly   359 -ATVASWEG-GAVRSRKATQTPTTPGQTSLQGNGGPPKPARRQSLLSVAWTDTDTGVEKIMWREI 421

  Fly   499 DSRARFVFPLSFLVFNLFFW 518
            |..:|.|||:.|.||.|.:|
  Fly   422 DKVSRAVFPILFFVFVLLYW 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:273305 111/475 (23%)
Neur_chan_LBD 36..259 CDD:280998 42/203 (21%)
Neur_chan_memb 270..518 CDD:280999 64/258 (25%)
CG12344NP_001286298.1 LIC 8..441 CDD:273305 110/473 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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