Protein Alignment CG6927 and gabrb2a

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001019558.2
• Gene: gabrb2a / 336252
• ZFINID: ZDB-GENE-030131-8196
• Length: 519
• Species: Danio rerio
• Alignment Length: 560
• Identity: 134/560 - (23%)
• Similarity: 256/560 - (45%)
• Gaps: 103/560 - (18%)

  Fly     5 LIISILLNCLYASASALDE--DCPTLDDGDSLSQTQLLDRLTHGCRYDRLERPITYSETGQRLPV 67
            ||:::      |.|.::.:  :.|.:.|        .:|||..|  ||...||    :.| ..||
Zfish    16 LIVAV------ACAQSIRDPSNMPVVKD--------TVDRLMKG--YDIRLRP----DFG-GAPV 59

  Fly    68 DVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIF 132
            .|.|...|..:..:...::.:.:....|..:.|.||::..:...    :..:..:.:.||:|..:
Zfish    60 AVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLN----LTLDNRVADQLWVPDTY 120

  Fly   133 LANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTS 197
            ..|::.|.:.|:|.|:.:..:.|||||:...||..|..|.::|:::|.|||:|:..:||:.|.|.
Zfish   121 FLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTD 185

  Fly   198 ELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVG 262
            ::..:|...     |||:...|.:....:|   :::..|.........|:|..||.:..|.|.:|
Zfish   186 DIEFYWRGG-----DGAVSGVERIELPQFS---IVDYKLISKNVVFSTGSYPRLSLSFKLKRNIG 242

  Fly   263 FYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVW 327
            ::::..::||:||..:||||||:..|.:..|:.||.:|:||..|:.:...:||||:.|:|..:::
Zfish   243 YFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMY 307

  Fly   328 FLGCTIFIFGSMVEFAFVNTIW------RRKKSVPVKKLNSKHILKSTLSPN------LLRR--- 377
            .:||.:|:|.:::|:||||.|:      |:||:  .:|..:.:..|....||      :::|
Zfish   308 LMGCFVFVFLALLEYAFVNYIFFGRGPQRQKKA--AEKAATANNEKLRPDPNKWLVGSVVQRDDA 370

  Fly   378 -RSHARSRSFSGTALHKT------ADTGSLGGAGFNNYLTV-NLPITTIKEGQVLDQQRTSRVVQ 434
             .:..:.|...|   :.:      |:..:||.......:|. ::.:||::....:.....||
Zfish   371 LYARMKQREIDG---YDSMWDPIFAEDAALGLGDQRLKMTPDDIRLTTVEMKNEMGPSDLSR--- 429

  Fly   435 KMDVNFVESAFGSMGSAQSTGAISAASSSQTLTNNNRTESAGH-------------------QEE 480
                        .:|..:||.....:|:.|........::.||                   |.:
Zfish   430 ------------GLGDPRSTMLAYDSSTLQYRRAAMARQNYGHSALERHATQKKSRLRRRASQLK 482

  Fly   481 IDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTF 520
            :::...:.:..      ||..:|.:||..|..||:.:|.:
Zfish   483 VNIPDLSDVNS------IDKWSRMIFPTLFSFFNIVYWLY 516

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	134/558 (24%)
		Neur_chan_LBD	36..259	CDD:280998	57/222 (26%)
		Neur_chan_memb	270..518	CDD:280999	68/289 (24%)
gabrb2a	NP_001019558.2	LIC	7..517	CDD:273305	134/560 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.810