Protein Alignment CG6927 and Gabrg2

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_001380704.1
• Gene: Gabrg2 / 29709
• RGDID: 61966
• Length: 474
• Species: Rattus norvegicus
• Alignment Length: 562
• Identity: 129/562 - (22%)
• Similarity: 210/562 - (37%)
• Gaps: 163/562 - (29%)

  Fly     9 ILLNCLYA--SASALDED------------CPTLDDGDSLSQTQLLDRLTHGCRYDRLERPITYS 59
            :||..||.  ::...|:|            .|.:.:||   .|.:|:.|..|  ||...||
  Rat    27 LLLLSLYPGFTSQKSDDDYEDYASNKTWVLTPKVPEGD---VTVILNNLLEG--YDNKLRP---- 82

  Fly    60 ETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRN 124
            :.|.: |..::...|:..:..:.|.::::.|.......:.|.||.|.:.....|.    ..::..
  Rat    83 DIGVK-PTLIHTDMYVNSIGPVNAINMEYTIDIFFAQTWYDRRLKFNSTIKVLRL----NSNMVG 142

  Fly   125 SLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVL 189
            .:|:|..|..|.:.:....:|..:.:..|..||.|:.:.|:.....|.|.|..||.||..|....
  Rat   143 KIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGRVLYTLRLTIDAECQLQLHNFPMDEHSCPLEF 207

  Fly   190 ESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRSW----------SNETVINADLSDLRHGAF 244
            .|:.|...|:|..|::......|          .|||          .|.|.:....|
  Rat   208 SSYGYPREEIVYQWKRSSVEVGD----------TRSWRLYQFSFVGLRNTTEVVKTTS------- 255

  Fly   245 AGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLAS 309
             |:|..:|....|:|.:|::.:..::|..|||.:||||||:..|..|.|.:||.:|:||..||::
  Rat   256 -GDYVVMSVYFDLSRRMGYFTIQTYIPCTLIVVLSWVSFWINKDAVPARTSLGITTVLTMTTLST 319

  Fly   310 AQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNL 374
            ...|:||||||:...:::...|.||:|.::||:..::.....:|  |.|..:.|
  Rat   320 IARKSLPKVSYVTAMDLFVSVCFIFVFSALVEYGTLHYFVSNRK--PSKDKDKK----------- 371

  Fly   375 LRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVN 439
               :.:...|.||..|                       |...|:
  Rat   372 ---KKNPLLRMFSFKA-----------------------PTIDIR-------------------- 390

  Fly   440 FVESAFGSMGSAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIA--------- 495
                                 ..|.|:..||.|......||.   |:..|..::.|
  Rat   391 ---------------------PRSATIQMNNATHLQERDEEY---GYECLDGKDCASFFCCFEDC 431

  Fly   496 ---MW-----------IDSRARFVFPLSFLVFNLFFW-TFVY 522
               .|           :||.||..||.:|.:|||.:| :::|
  Rat   432 RTGAWRHGRIHIRIAKMDSYARIFFPTAFCLFNLVYWVSYLY 473

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	128/558 (23%)
		Neur_chan_LBD	36..259	CDD:280998	52/232 (22%)
		Neur_chan_memb	270..518	CDD:280999	64/270 (24%)
Gabrg2	NP_001380704.1	LIC	68..471	CDD:273305	118/514 (23%)
		LGIC_ECD_GABAAR_G	89..270	CDD:349801	42/202 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900