Protein Alignment CG6927 and Gabrr2

DIOPT Version :10

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_038965308.1
• Gene: Gabrr2 / 29695
• RGDID: 61902
• Length: 491
• Species: Rattus norvegicus
• Alignment Length: 462
• Identity: 112/462 - (24%)
• Similarity: 211/462 - (45%)
• Gaps: 77/462 - (16%)

  Fly    62 GQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSL 126
            |..:||.|.::  :..:.::...|:.|.:...|:..:.|.||.|.:.|   .:.:..:..|...:
  Rat   100 GPAIPVGVDVQ--VESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSS---NRSMTFDGRLVKKI 159

  Fly   127 WMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLES 191
            |:|.:|..:.:.|.....|..:|:..:.|||.|:.|.||..|..|.::...||.|.|.||..|||
  Rat   160 WVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELES 224

  Fly   192 WMYNTSELVLHWEQ-KRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYSSLSFTV 255
            :.|...:|:|:|:. ...:..|..:.|::|::|:..:.        |.|...:..|.|:.|....
  Rat   225 YAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTT--------SRLAFYSSTGWYNRLYINF 281

  Fly   256 HLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSY 320
            .|.|.:.|:|:..:.|:.|:|.:||||||:.....|.|::||..|:||..|:.:....::|:|||
  Rat   282 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSY 346

  Fly   321 IKVSEVWFLGCTIFIFGSMVEFAFVN---TIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHAR 382
            |:..:::.....:|:|.|::|:|.||   |:..:|:    :||..|.    ..:..:|    |:|
  Rat   347 IRAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQEQKE----RKLRDKF----PCTCGML----HSR 399

  Fly   383 SRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGS 447
            :.:..|:  :..::..||.|...::.|.              :::|..::|..:.:|      ..
  Rat   400 TMTLDGS--YSESEANSLAGYPRSHILP--------------EEERQDKIVVHLALN------SE 442

  Fly   448 MGSAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLV 512
            :.|::..|.:..........|.:.                          ||..:|.:||..::|
  Rat   443 LTSSRKKGLLKGQMGLYIFQNTHA--------------------------IDKYSRLIFPAFYIV 481

  Fly   513 FNLFFWT 519
            |||.:|:
  Rat   482 FNLIYWS 488

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:455710	112/462 (24%)
Gabrr2	XP_038965308.1	LIC	87..490	CDD:455710	112/462 (24%)
		LGIC_ECD_GABAAR_rho	102..287	CDD:349806	51/197 (26%)
		Cys-loop	204..218	CDD:349806	5/13 (38%)