DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6927 and GLRA1

DIOPT Version :10

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_047273061.1 Gene:GLRA1 / 2741 HGNCID:4326 Length:465 Species:Homo sapiens


Alignment Length:499 Identity:146/499 - (29%)
Similarity:232/499 - (46%) Gaps:102/499 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSQTQLLDRL---THGCRYDRLERPITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQ 95
            :|.:..||:|   |.|  ||...||     ..:..||:|....:|....::....:.:::...|:
Human    52 MSPSDFLDKLMGRTSG--YDARIRP-----NFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLR 109

  Fly    96 MRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVI 160
            .::.||||.: |..|.....:  :..:.:|:|.|.:|.|||:.:....:|..:.|..||.:|.|:
Human   110 QQWNDPRLAY-NEYPDDSLDL--DPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVL 171

  Fly   161 VSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRS 225
            .|.||..||.|.::||.||.|.|.|...|||:.|..::|:..|:::..:.....|.|.:|:|:..
Human   172 YSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQEQGAVQVADGLTLPQFILKEE 236

  Fly   226 WSNETVINADLSDLRHGA---FAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQA 287
                       .|||:..   ..|.::.:....||.|.:|:||:..::||:|||.:||:|||:..
Human   237 -----------KDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINM 290

  Fly   288 DQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRK 352
            |.||.|:.||.:|:||..|.:|....:||||||:|..::|...|.:|:|.:::|:|.||.:.|:.
Human   291 DAAPARVGLGITTVLTMTTQSSGSRASLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQH 355

  Fly   353 KSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITT 417
            |                   .|||.|...|.        ||..:.|                   
Human   356 K-------------------ELLRFRRKRRH--------HKEDEAG------------------- 374

  Fly   418 IKEGQVLDQQRTSRVVQKMDVNFVESAFGSMGSA--QSTGAISAASSSQTLTNNNRTESAGHQEE 480
              ||:               .||  ||:| ||.|  |:...||...::.:.|.|.....:...||
Human   375 --EGR---------------FNF--SAYG-MGPACLQAKDGISVKGANNSNTTNPPPAPSKSPEE 419

  Fly   481 IDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTFVYCI 524
            :     ..|..|. |..||..:|..||::||:||:|:| .:|.|
Human   420 M-----RKLFIQR-AKKIDKISRIGFPMAFLIFNMFYW-IIYKI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:455710 144/493 (29%)
GLRA1XP_047273061.1 LIC 24..454 CDD:273305 144/495 (29%)

Return to query results.
Submit another query.