DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6927 and GLRA1

DIOPT Version :9

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001139512.1 Gene:GLRA1 / 2741 HGNCID:4326 Length:457 Species:Homo sapiens


Alignment Length:530 Identity:150/530 - (28%)
Similarity:245/530 - (46%) Gaps:101/530 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WSLIISILLNCLYASASALDEDCPTLDDGDSLSQTQLLDRL---THGCRYDRLERPITYSETGQR 64
            |..|:...|.....:.:|.....|       :|.:..||:|   |.|  ||...||     ..:.
Human    12 WETIVFFSLAASKEAEAARSAPKP-------MSPSDFLDKLMGRTSG--YDARIRP-----NFKG 62

  Fly    65 LPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMP 129
            .||:|....:|....::....:.:::...|:.::.||||.: |..|.....:  :..:.:|:|.|
Human    63 PPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAY-NEYPDDSLDL--DPSMLDSIWKP 124

  Fly   130 HIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMY 194
            .:|.|||:.:....:|..:.|..||.:|.|:.|.||..||.|.::||.||.|.|.|...|||:.|
Human   125 DLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGY 189

  Fly   195 NTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGA---FAGNYSSLSFTVH 256
            ..::|:..|:::..:.....|.|.:|:|:..           .|||:..   ..|.::.:....|
Human   190 TMNDLIFEWQEQGAVQVADGLTLPQFILKEE-----------KDLRYCTKHYNTGKFTCIEARFH 243

  Fly   257 LTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYI 321
            |.|.:|:||:..::||:|||.:||:|||:..|.||.|:.||.:|:||..|.:|....:||||||:
Human   244 LERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRASLPKVSYV 308

  Fly   322 KVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSF 386
            |..::|...|.:|:|.:::|:|.||.:.|:          .|.:|:      ..|:|.|.:|...
Human   309 KAIDIWMAVCLLFVFSALLEYAAVNFVSRQ----------HKELLR------FRRKRRHHKSPML 357

  Fly   387 SGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGSMGSA 451
            :   |.:..:.|                     ||:               .||  ||:| ||.|
Human   358 N---LFQEDEAG---------------------EGR---------------FNF--SAYG-MGPA 380

  Fly   452 --QSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFN 514
              |:...||...::.:.|.|.....:...||:     ..|..|. |..||..:|..||::||:||
Human   381 CLQAKDGISVKGANNSNTTNPPPAPSKSPEEM-----RKLFIQR-AKKIDKISRIGFPMAFLIFN 439

  Fly   515 LFFWTFVYCI 524
            :|:| .:|.|
Human   440 MFYW-IIYKI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:273305 148/524 (28%)
Neur_chan_LBD 36..259 CDD:280998 62/228 (27%)
Neur_chan_memb 270..518 CDD:280999 75/249 (30%)
GLRA1NP_001139512.1 LIC 7..446 CDD:273305 148/526 (28%)
Strychnine-binding. /evidence=ECO:0000250|UniProtKB:O93430 230..235 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 391..410 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18945
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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