Sequence 1: | NP_572194.1 | Gene: | CG6927 / 31419 | FlyBaseID: | FBgn0029733 | Length: | 524 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001023062.1 | Gene: | lgc-43 / 259591 | WormBaseID: | WBGene00008076 | Length: | 679 | Species: | Caenorhabditis elegans |
Alignment Length: | 309 | Identity: | 66/309 - (21%) |
---|---|---|---|
Similarity: | 137/309 - (44%) | Gaps: | 24/309 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 YDRLERPITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRL--NFRNVSPK 111
Fly 112 RRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLK 176
Fly 177 KFPFDEQHCSTVLESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRH 241
Fly 242 GAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFIT 306
Fly 307 LASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSV 355 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG6927 | NP_572194.1 | LIC | 3..520 | CDD:273305 | 66/309 (21%) |
Neur_chan_LBD | 36..259 | CDD:280998 | 44/211 (21%) | ||
Neur_chan_memb | 270..518 | CDD:280999 | 21/86 (24%) | ||
lgc-43 | NP_001023062.1 | LGIC_ECD_anion | 344..523 | CDD:349788 | 40/194 (21%) |
LGIC_TM | 527..665 | CDD:365787 | 21/92 (23%) | ||
TM1 helix | 527..551 | CDD:349850 | 5/23 (22%) | ||
TM2 helix | 555..577 | CDD:349850 | 6/23 (26%) | ||
TM3 helix | 583..609 | CDD:349850 | 7/25 (28%) | ||
TM4 helix | 610..665 | CDD:349850 | 1/7 (14%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3644 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18945 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |