Protein Alignment CG6927 and lgc-42

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: NP_497489.3
• Gene: lgc-42 / 189722
• WormBaseID: WBGene00021437
• Length: 412
• Species: Caenorhabditis elegans
• Alignment Length: 461
• Identity: 113/461 - (24%)
• Similarity: 189/461 - (40%)
• Gaps: 99/461 - (21%)

  Fly    64 RLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWM 128
            :.|:.|:...|:..:.|..|.::.:.:...|.|.:.|..:...    :....::.::.:.:.:|:
 Worm    38 KAPLQVHFGFYVESLGNFRATEMTYDMDMYLYMSWQDDSMRHN----ETEHVLVNDKDILDKIWL 98

  Fly   129 PHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWM 193
            |.::.||.|.:....:|..:....|||.||:....|:...|.|.|:||.:|.|.|.|...:.|:.
 Worm    99 PDLYFANARTAYFHKVTVHNFNMFISPQGTISYGTRVTLNLACNLDLKDYPLDYQTCYIKVISYA 163

  Fly   194 YNTSELVLHWEQKRPITYDGALHLTEF---VLQRSWSNETVINADLSDLRHGAF-AGNYSSLSFT 254
            :..:|:.:.|....||.::..:.|.||   .|.:.:.|    ...|..|.|.:. .|.:|.|...
 Worm   164 HVKNEMNVSWFPNDPIRFNPEIDLPEFHIRALDKDYCN----GVFLYTLTHNSSRVGEFSCLLGM 224

  Fly   255 VHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVS 319
            :.|.|.:||:|:..::|:.|||||||||||:.....|.|::|..:||||..|..:.....||.||
 Worm   225 LKLKRAIGFHLVQSYIPTGLIVAISWVSFWIDRRAVPARVSLSFTTLLTLSTQGNGIRYALPAVS 289

  Fly   320 YIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHARSR 384
            |.|..:.::..|.:||||.::|||.||:..||.
 Worm   290 YAKAIDYFYGVCMLFIFGVLLEFAAVNSYMRRA-------------------------------- 322

  Fly   385 SFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGSMG 449
                                 |.|                     :.:.:|     ::||:|  |
 Worm   323 ---------------------NKY---------------------NHMAEK-----IQSAYG--G 338

  Fly   450 SAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFN 514
            ........|......|....|..:::.|..      :..|.....|:.||..|||.||..|.:||
 Worm   339 KPIIADYDSDYEEGPTKYYGNLNKNSAHLM------YKALKFSRKALSIDKAARFAFPCVFAIFN 397

  Fly   515 LFFWTF 520
            :|:|.:
 Worm   398 VFYWLY 403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	113/459 (25%)
		Neur_chan_LBD	36..259	CDD:280998	46/198 (23%)
		Neur_chan_memb	270..518	CDD:280999	62/247 (25%)
lgc-42	NP_497489.3	Neur_chan_LBD	36..192	CDD:280998	37/157 (24%)
		Neur_chan_memb	239..401	CDD:280999	62/248 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR18945
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.910