DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6927 and Gabrr2

DIOPT Version :9

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_032102.2 Gene:Gabrr2 / 14409 MGIID:95626 Length:490 Species:Mus musculus


Alignment Length:462 Identity:112/462 - (24%)
Similarity:207/462 - (44%) Gaps:77/462 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSL 126
            |..:||.|.::  :..:.::...|:.|.:...|:..:.|.||.|.:.|.|   .:..:..|...:
Mouse    99 GPAIPVGVDVQ--VESLDSISEVDMDFTMTLYLRHYWRDERLAFPSSSNK---SMTFDGRLVKKI 158

  Fly   127 WMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCSTVLES 191
            |:|.:|..:.:.|.|...|..:|:..:.|||.|:.|.||..|..|.::...||.|.|.||..|||
Mouse   159 WVPDVFFVHSKRSFIHDTTTDNIMLRVFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELES 223

  Fly   192 WMYNTSELVLHWEQ-KRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAFAGNYSSLSFTV 255
            :.|...:|:|:|:. ...:..|..:.|::|::|:..:.        |.|...:..|.|:.|....
Mouse   224 YAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQKFHTT--------SRLAFYSSTGWYNRLYINF 280

  Fly   256 HLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVSY 320
            .|.|.:.|:|:..:.|:.|:|.:||||||:.....|.|::||..|:||..|:.:....::|:|||
Mouse   281 TLRRHIFFFLLQTYFPATLMVMLSWVSFWIDHRAVPARVSLGIMTVLTMSTIITGVNASMPRVSY 345

  Fly   321 IKVSEVWFLGCTIFIFGSMVEFAFVN---TIWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHAR 382
            |:..:::.....:|:|.|::|:|.||   |:..:|:    :|...|......:        .|:|
Mouse   346 IRAVDIYLWVSFVFVFLSVLEYAAVNYLTTLQEQKE----RKFREKLPCMCGM--------LHSR 398

  Fly   383 SRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGS 447
            :....|:  :..::..||.|...::.|.              :::|...:|..:.:|      ..
Mouse   399 TMMLDGS--YSESEANSLAGYPRSHILP--------------EEERPDNIVVHLALN------SE 441

  Fly   448 MGSAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLV 512
            :.|::..|.:..........|.:.                          ||..:|.:||..::|
Mouse   442 LTSSRKKGLLKGQMGLYIFQNTHA--------------------------IDKYSRLIFPAFYIV 480

  Fly   513 FNLFFWT 519
            |||.:|:
Mouse   481 FNLIYWS 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:273305 112/462 (24%)
Neur_chan_LBD 36..259 CDD:280998 53/197 (27%)
Neur_chan_memb 270..518 CDD:280999 55/250 (22%)
Gabrr2NP_032102.2 LIC 74..489 CDD:273305 112/462 (24%)
Neur_chan_LBD 87..286 CDD:280998 54/199 (27%)
Neur_chan_memb 293..486 CDD:280999 55/252 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3644
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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