Protein Alignment CG6927 and Gabrg3

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_017177467.1
• Gene: Gabrg3 / 14407
• MGIID: 95624
• Length: 468
• Species: Mus musculus
• Alignment Length: 548
• Identity: 128/548 - (23%)
• Similarity: 226/548 - (41%)
• Gaps: 116/548 - (21%)

  Fly     5 LIISILLNCLYASASALDED-------------CPTLDDGDSLSQTQLLDRLTHGCRYDRLERPI 56
            |::..|.:.|:|.:..::||             .|...|.|   .|.:|::|..  .||:..||
Mouse     6 LLLLCLFSGLHARSRRVEEDENEDSPSNQKWVLAPKSQDTD---VTLILNKLLR--EYDKKLRP- 64

  Fly    57 TYSETGQR---LPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILG 118
               :.|.:   :.||:|:.:    :..:.:.:::::|.......:.|.||.|.:.     ..||.
Mouse    65 ---DIGIKPTVIDVDIYVNS----IGPVSSINMEYQIDIFFAQTWTDSRLRFNST-----MKILT 117

  Fly   119 -EEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDE 182
             ..::...:|:|.....|.:.:....:|..:.|..|..||.::.:.|:.....|.|.|..||.|.
Mouse   118 LNSNMVGLIWIPDTIFRNSKTAEAHWITTPNQLLRIWNDGKILYTLRLTINAECQLQLHNFPMDA 182

  Fly   183 QHCSTVLESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRH-----G 242
            ..|.....|:.|...|::..|.:          :..|...|:||   .:...|...||:     .
Mouse   183 HACPLTFSSYGYPKEEMIYRWRK----------NSVEAADQKSW---RLYQFDFMGLRNTTEIVT 234

  Fly   243 AFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITL 307
            ..||:|..::....|:|.:|::.:..::|.:|.|.:||||||::.|..|.|.|||.:|:||..||
Mouse   235 TSAGDYVVMTIYFELSRRMGYFTIQTYIPCILTVVLSWVSFWIKKDATPARTTLGITTVLTMTTL 299

  Fly   308 ASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSP 372
            ::...|:||:|||:...:::...|.:|:|.:::|:|.:|.....:|....||..|:     .|.|
Mouse   300 STIARKSLPRVSYVTAMDLFVTVCFLFVFAALMEYATLNYYSSCRKPTIRKKKTSQ-----LLHP 359

  Fly   373 NLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLP---ITTIKEGQVLDQQRTSRVVQ 434
            :..|                ...|..||......:.|.:..|   :.|:.......:...:.|.:
Mouse   360 DSTR----------------WIPDRISLQAPSNYSLLDMRPPPPVMITLNNSMYWQEFEDTCVYE 408

  Fly   435 KMDVNFVESAFGSMGSAQS----TGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIA 495
            .:|....:|.|......:|    .|.|                      .||:|.
Mouse   409 CLDGKDCQSFFCCYEECKSGSWRRGRI----------------------HIDVSE---------- 441

  Fly   496 MWIDSRARFVFPLSFLVFNLFFWT-FVY 522
              :||.:|..||.|||:|||.:|. ::|
Mouse   442 --LDSYSRVFFPTSFLLFNLVYWVGYLY 467

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	127/544 (23%)
		Neur_chan_LBD	36..259	CDD:280998	49/231 (21%)
		Neur_chan_memb	270..518	CDD:280999	66/254 (26%)
Gabrg3	XP_017177467.1	LIC	50..465	CDD:273305	117/497 (24%)
		LGIC_ECD_GABAAR_G	71..252	CDD:349801	41/202 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3644
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900