DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6927 and Gabrb3

DIOPT Version :10

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_032097.1 Gene:Gabrb3 / 14402 MGIID:95621 Length:473 Species:Mus musculus


Alignment Length:520 Identity:128/520 - (24%)
Similarity:237/520 - (45%) Gaps:107/520 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DDGDSLSQTQLLDRLTHGCRYDRLERPITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYAL 93
            |.|:.....:.:|:|..|  ||...||    :.|.. ||.|.|...|..:..:...::.:.:...
Mouse    30 DPGNMSFVKETVDKLLKG--YDIRLRP----DFGGP-PVCVGMNIDIASIDMVSEVNMDYTLTMY 87

  Fly    94 LQMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGT 158
            .|..:.|.||.:..:...    :..:..:.:.||:|..:..|::.|.:.|:|.|:.:..:.||||
Mouse    88 FQQYWRDKRLAYSGIPLN----LTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGT 148

  Fly   159 VIVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHWE-QKRPITYDGALHLTEF-V 221
            |:...||..|..|.::|:::|.|||:|:..:||:.|.|.::..:|. ..:.:|....:.|.:| :
Mouse   149 VLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGGDKAVTGVERIELPQFSI 213

  Fly   222 LQRSWSNETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQ 286
            ::....:..|:.|          .|.|..||.:..|.|.:|::::..::||:||..:||||||:.
Mouse   214 VEHRLVSRNVVFA----------TGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWIN 268

  Fly   287 ADQAPPRITLGTSTLLTFITLASAQGKTLPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIW-- 349
            .|.:..|:.||.:|:||..|:.:...:||||:.|:|..:::.:||.:|:|.:::|:||||.|:  
Mouse   269 YDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFG 333

  Fly   350 ---RRKKSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTV 411
               :|:|.:..|...:|                :.||:|    .:::....|::           
Mouse   334 RGPQRQKKLAEKTAKAK----------------NDRSKS----EINRVDAHGNI----------- 367

  Fly   412 NLPITTIKEGQVLDQQRTSRVVQKMDV-NFVESAFGSMGSAQSTGAISAASS-----SQTLTNNN 470
                                ::..||| |.:....||:|..::: |||..:|     .|::....
Mouse   368 --------------------LLAPMDVHNEMNEVAGSVGDTRNS-AISFDNSGIQYRKQSMPKEG 411

  Fly   471 RTESAG---------------HQEEIDLSGWTTLTPQEIAMWIDSRARFVFPLSFLVFNLFFWTF 520
            .....|               .|.:|.:...|.:..      ||..:|.|||.:|.:|||.:|.:
Mouse   412 HGRYMGDRSIPHKKTHLRRRSSQLKIKIPDLTDVNA------IDRWSRIVFPFTFSLFNLVYWLY 470

  Fly   521  520
            Mouse   471  470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:455710 128/518 (25%)
Gabrb3NP_032097.1 LIC 10..471 CDD:273305 128/520 (25%)

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