Protein Alignment CG6927 and gabra5

DIOPT Version :9

• Sequence 1: NP_572194.1
• Gene: CG6927 / 31419
• FlyBaseID: FBgn0029733
• Length: 524
• Species: Drosophila melanogaster
• Sequence 2: XP_004911866.1
• Gene: gabra5 / 100494208
• XenbaseID: XB-GENE-980292
• Length: 475
• Species: Xenopus tropicalis
• Alignment Length: 541
• Identity: 132/541 - (24%)
• Similarity: 220/541 - (40%)
• Gaps: 131/541 - (24%)

  Fly     4 SLIISILLNCLY-----------ASASALDEDCPTLDDGDSLS-QTQLLDRLTHGCRYDRLERPI 56
            |.|.:||..||:           .:|:.:.|     |..|::: .|::||.|..|  ||...||
 Frog    14 SQIEAILFFCLFLALATNFSMSQTTAAPVKE-----DTNDNITIFTRILDGLLDG--YDNRLRP- 70

  Fly    57 TYSETGQRL---PVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFRNVSPKRRQPILG 118
               ..|:|:   ..|:|:.::    ..:...::::.|....:..:.|.||.|:  .|..|.|:
 Frog    71 ---GLGERITQVKTDIYVTSF----GPVSDTEMEYTIDVFFRQSWKDERLCFQ--GPMPRLPL-- 124

  Fly   119 EEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQ 183
            ...|.:.:|.|..|..|.:.|....:|..:.|..:..|||::.:.|:..:..|.:.|:.||.|..
 Frog   125 NNLLASKIWTPDTFFHNGKKSIAHNITTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAH 189

  Fly   184 HCSTVLESWMYNTSELVLHW----EQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGAF 244
            .|.....|:.|..|||...|    ::...:..||: .|.::.|    ..:||...::|     ..
 Frog   190 ACPLKFGSYAYPNSELRYEWTNITDKSVVVAEDGS-RLNQYHL----IGQTVGTENIS-----TS 244

  Fly   245 AGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLAS 309
            .|.|:.::...||.|.:|::::..:||.::.|.:|.|||||..:..|.|...|.:|:||..||:.
 Frog   245 TGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI 309

  Fly   310 AQGKTLPKVSYIKVSEVWFLG-CTIFIFGSMVEFAFVNTI------WRRKKSVPVKKLNSKHILK 367
            :...:||||:|....: ||:. |..|:|.:::|||.||..      |..||::...|:..|
 Frog   310 SARNSLPKVAYATAMD-WFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKALEAAKIKKK---- 369

  Fly   368 STLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRV 432
                                        :..|||....|:| :..:|.|     ..:.:..||.|
 Frog   370 ----------------------------EQESLGRKPINSY-SGRIPYT-----PNMSKDLTSSV 400

  Fly   433 VQKMDVNFVESAFGSMGSAQSTGAISAASSSQTLTNNNRTESAGHQEEIDLSGWTTLTPQEIAMW 497
            :                       .:|||.....|.....||......:..
 Frog   401 I-----------------------ANAASIHMKTTEEKCAESKKTYNSVSK-------------- 428

  Fly   498 IDSRARFVFPLSFLVFNLFFW 518
            ||..:|.|||:.|..|||.:|
 Frog   429 IDKMSRIVFPVMFGTFNLVYW 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6927	NP_572194.1	LIC	3..520	CDD:273305	132/541 (24%)
		Neur_chan_LBD	36..259	CDD:280998	56/229 (24%)
		Neur_chan_memb	270..518	CDD:280999	63/254 (25%)
gabra5	XP_004911866.1	LIC	25..452	CDD:273305	126/530 (24%)
		LGIC_ECD_GABAAR_A5	62..260	CDD:349839	52/221 (24%)
		Cys-loop	177..191	CDD:349839	5/13 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910