DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6927 and XB5799637

DIOPT Version :9

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_031762346.1 Gene:XB5799637 / 100490720 XenbaseID:XB-GENE-5799638 Length:409 Species:Xenopus tropicalis


Alignment Length:527 Identity:125/527 - (23%)
Similarity:211/527 - (40%) Gaps:166/527 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DGDSLSQTQLLDRLTHGCRYDRLERPITYSETGQRLPVDVYMRAYIYFMQNLEAHDLQFKIYALL 94
            :|:.|..|  :.:|..|  |::..||  :.:.|   ||.|.|...|..:..:...::.:.....|
 Frog     9 EGEILPPT--IQKLMKG--YNKYLRP--FFDNG---PVTVGMSLDIASIDTISEINMDYTATIFL 64

  Fly    95 QMRYLDPRLNFRNVSPKRRQPILGEEHLRNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTV 159
            :.|:.|.||.|.:     .:.:..:..|...||:|..|:.:.:.|.:..:|.::.|..|.|:|||
 Frog    65 RQRWTDERLCFES-----NKSLSLDGRLVELLWVPDTFIVDSKKSFLHDMTVENRLIRIYPNGTV 124

  Fly   160 IVSNRIKATLYCWLNLKKFPFDEQHCSTVLESWMYNTSELVLHW----EQKRPITYDGALHLTEF 220
            :.:.||..|:.|.::|.|:|.|:|.|:..||||.|||::::.:|    :..|.:   .||.|.::
 Frog   125 LYALRITTTVACSMDLTKYPMDKQTCTLXLESWSYNTNDVMFYWTRGNDSVRGL---DALRLAQY 186

  Fly   221 VLQRSWS--NETVINADLSDLRHGAFAGNYSSLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSF 283
            .::..::  :|.|..           .|.|..|.|...|.|.:.:::::.::||:|:|.:|||||
 Frog   187 AVEDHYTSVSEAVYE-----------TGRYPKLVFHFDLKRNILYFILETYVPSILLVVLSWVSF 240

  Fly   284 WLQADQAPPRITLGTSTLLTFITLASAQGKTLPKVS-YIKVSEVWFLGCTIFIFGSMVEFAFVNT 347
            |:.....|.||.:|.:|:||..||......:||..: :||..:|:...|..||||:::|:|..:.
 Frog   241 WISLSSVPARICIGVTTVLTMTTLMMGARTSLPNANCFIKAIDVYLGICFSFIFGALLEYAIAHF 305

  Fly   348 IWRRKKSVPVKKLNSKHILKSTLSPNLLRRRSHARSRSFSGTALHKTADTGSLGGAGFNNYLTVN 412
            .                                         .||:.....|             
 Frog   306 Y-----------------------------------------TLHQPHQKNS------------- 316

  Fly   413 LPITTIKEGQVLDQQRTSRVVQKMDVNFVESAFGSMGSAQSTGAISAASSSQTLTNNNRTESAGH 477
                |||:....|:                        |...|.|||.|..|:           |
 Frog   317 ----TIKKLVAEDE------------------------ADMNGTISAVSDGQS-----------H 342

  Fly   478 QEEIDLSGWTTLTPQEIAMW-----------------------------IDSRARFVFPLSFLVF 513
            |.|         .|.||...                             ||:.:|..|||||::.
 Frog   343 QTE---------PPDEIGNGKKKIKSPVDPVLKRLLCVFYCFQVQNPHDIDNYSRISFPLSFMII 398

  Fly   514 NLFFWTF 520
            |:|:|.:
 Frog   399 NVFYWAY 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:273305 125/525 (24%)
Neur_chan_LBD 36..259 CDD:280998 60/228 (26%)
Neur_chan_memb 270..518 CDD:280999 61/277 (22%)
XB5799637XP_031762346.1 LIC 2..406 CDD:273305 125/527 (24%)
LGIC_ECD_GABAAR_pi 36..217 CDD:349805 53/199 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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