DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6927 and glra3

DIOPT Version :9

Sequence 1:NP_572194.1 Gene:CG6927 / 31419 FlyBaseID:FBgn0029733 Length:524 Species:Drosophila melanogaster
Sequence 2:XP_002933371.1 Gene:glra3 / 100488938 XenbaseID:XB-GENE-1011160 Length:449 Species:Xenopus tropicalis


Alignment Length:547 Identity:147/547 - (26%)
Similarity:234/547 - (42%) Gaps:150/547 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WSLIISILLNCLYASASALDEDCPTLDDGDSLSQTQLLDRL---THGCRYDRLERPITYSETGQR 64
            |...:.:.|.....:.||.....|       :|.:..||:|   |.|  ||...||     ..:.
 Frog    17 WEAALLLSLVATKETDSARSRPSP-------MSPSDFLDKLMGRTSG--YDARIRP-----NFKG 67

  Fly    65 LPVDVYMRAYIYFMQNLEAHDLQFKIYALLQMRYLDPRLNFR-------NVSPKRRQPILGEEHL 122
            .||:|....::....::....:.:::...|:.::.||||.:.       ::.|.          :
 Frog    68 PPVNVTCNIFVNSFGSIAETTMDYRLNIFLRQKWNDPRLAYSEYPDDSLDLDPS----------M 122

  Fly   123 RNSLWMPHIFLANERDSSILGLTEKDILTSISPDGTVIVSNRIKATLYCWLNLKKFPFDEQHCST 187
            .:|:|.|.:|.|||:.::...:|..:.|..|..||.|:.|.|:..||.|.::||.||.|.|.|..
 Frog   123 LDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKDGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIM 187

  Fly   188 VLESWMYNTSELVLHWEQKRPITYDGALHLTEFVLQRSWSNETVINADLSDLRHGA---FAGNYS 249
            .|||:.|..::|:..|::..|:.....|.|.:|||:..           .|||:..   ..|.::
 Frog   188 QLESFGYTMNDLIFEWQENGPVQIADGLTLPQFVLKEE-----------KDLRYCTKHYNTGKFT 241

  Fly   250 SLSFTVHLTRVVGFYLMDYFLPSMLIVAISWVSFWLQADQAPPRITLGTSTLLTFITLASAQGKT 314
            .:....||.|.:|:||:..::||:|||.:||||||:..|.||.|:.||.:|:||..|.:|....:
 Frog   242 CIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQSSGSRAS 306

  Fly   315 LPKVSYIKVSEVWFLGCTIFIFGSMVEFAFVNTIWRRKKSVPVKKLNSKHILKSTLSPNLLR-RR 378
            ||||||:|..::|...|.:|:|.:::|:|.||.:.|:.|                   .||| ||
 Frog   307 LPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHK-------------------ELLRFRR 352

  Fly   379 SHARSRSFSGTALHKTADTGSLGGAGFNNYLTVNLPITTIKEGQVLDQQRTSRVVQKMDVNFVES 443
            ...:.|.                                       |..|.||        |..:
 Frog   353 KRKKDRD---------------------------------------DDVRESR--------FSFT 370

  Fly   444 AFGSMG-------SAQSTGAISAASSSQTLTNNNRTESAGHQEE----IDLSGWTTLTPQEIAMW 497
            |:| ||       .....|.::|..:.:|           |:|.    ||.           |..
 Frog   371 AYG-MGPCLQAKDGVNPKGPLNAPPAPKT-----------HEEMRKVFIDR-----------AKK 412

  Fly   498 IDSRARFVFPLSFLVFNLFFWTFVYCI 524
            ||:.:|..|||:||:||:|:|. :|.|
 Frog   413 IDTLSRACFPLAFLIFNIFYWV-IYKI 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6927NP_572194.1 LIC 3..520 CDD:273305 145/541 (27%)
Neur_chan_LBD 36..259 CDD:280998 61/235 (26%)
Neur_chan_memb 270..518 CDD:280999 73/259 (28%)
glra3XP_002933371.1 LIC 12..436 CDD:273305 145/543 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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