DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6978 and FEN2

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_009957.1 Gene:FEN2 / 850394 SGDID:S000000623 Length:512 Species:Saccharomyces cerevisiae


Alignment Length:516 Identity:107/516 - (20%)
Similarity:183/516 - (35%) Gaps:133/516 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DSKGVSNRNRSDQEVRMERYASDGQIPRCRKTRFFVVLMLFS--------------GMANAYVMR 59
            :||.:     :..||..|..:|...|.: |...|.:.|.:.|              |..|||:  
Yeast     4 ESKSI-----TQHEVERESVSSKRAIKK-RLLLFKIDLFVLSFVCLQYWINYVDRVGFTNAYI-- 60

  Fly    60 TNMSVAIVAMVNHTAISHTKSSTQSKERDGDFEWSYKLQGYILSSFFYGYVITQIPFGLMIKYYG 124
            :.|...:..:.|...:|:|                         .|..||::..:|..||:....
Yeast    61 SGMKEDLKMVGNDLTVSNT-------------------------VFMIGYIVGMVPNNLMLLCVP 100

  Fly   125 ARHFL-----GWGMMINSLAAFFIPISARSGGVVGLCVVRFIQGLGEGPIVPCSHSLLAQWVPPN 184
            .|.:|     .||::  :|..:.:.      ....:|.:||.|.|.|......:|.:|..|...:
Yeast   101 PRIWLSFCTFAWGLL--TLGMYKVT------SFKHICAIRFFQALFESCTFSGTHFVLGSWYKED 157

  Fly   185 ERSLAGAAVYAGAQFGTIVSMPLSG-----LLAHY-GFDG--GWPSIFY----------IFGLFS 231
            |..:. :|::.|:  |.:.|| .||     :..|. |.:|  ||..:|.          |:|.  
Yeast   158 ELPIR-SAIFTGS--GLVGSM-FSGFMQTSIFTHLNGRNGLAGWRWLFIIDFCITLPIAIYGF-- 216

  Fly   232 TIWCIIFICLVQESPAVS----TR-ISEAERRHIMEAIWQAQPEERSRIPFLGIAKSPP-----F 286
                |.|..|..::.|||    || |...:..|.......|: :|.:|:.:..|.:...     .
Yeast   217 ----IFFPGLPDQTSAVSKFSMTRYIFNEQELHYARRRLPAR-DESTRLDWSTIPRVLKRWHWWM 276

  Fly   287 YAILVAHAGHNYGY---ETLMTMLPTYMYRVLNVNIRTNGI--------------ISSLPYLAMW 334
            ::::....|.|.|:   .|....|....|.:...|...:||              :|.:|....|
Yeast   277 FSLVWVLGGENLGFASNSTFALWLQNQKYTLAQRNNYPSGIFAVGIVSTLCSAVYMSKIPRARHW 341

  Fly   335 ----ILAIVFGILADCLIRR---NFSITVVRKLMNSLGQYGPAVALISVGFVHHSLWLTSVIFIL 392
                .:::|..|:| .|||.   |..:....:.:..:...|.||.......:.|:......|.:.
Yeast   342 HVSVFISLVMVIVA-VLIRADPLNPKVVFSAQYLGGVAYAGQAVFFSWANIICHADLQERAIVLA 405

  Fly   393 GMGL-NGAIYCGFKINHL--DLSPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVEN 450
            .|.: :||:...:.|...  |:.|:|.      ..|.|.|...::..:...||......||
Yeast   406 SMNMFSGAVNAWWSILFFASDMVPKFE------RGCYALLATAISSGIVSVVIRSLQIKEN 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 100/487 (21%)
MFS 45..473 CDD:119392 98/480 (20%)
FEN2NP_009957.1 MFS_FEN2_like 32..450 CDD:340885 94/470 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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