DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6978 and SPCC417.10

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_588287.1 Gene:SPCC417.10 / 2539419 PomBaseID:SPCC417.10 Length:508 Species:Schizosaccharomyces pombe


Alignment Length:445 Identity:95/445 - (21%)
Similarity:167/445 - (37%) Gaps:126/445 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KLQGYILS----SFFYGYVITQIPFGLMIKYYGARHFLG-----WGMMINSLAAFFIPISARSGG 151
            |::|.:.|    :|:.||::.:.|..|:::.:.....|.     ||.::...:....|       
pombe    96 KMEGQMYSWSGTAFYLGYLVFEFPASLLLQRFPLSKTLCVFLVIWGFLLCMTSVANYP------- 153

  Fly   152 VVGLCVVRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGLLAHYGF 216
              |...:|.:.|:.|....|....|.|||...:|:.|..:...|....|.|:     |....||.
pombe   154 --GFIALRVLLGMMESAASPGFILLTAQWYKRSEQQLRTSVWVAFNGLGQIL-----GSCMAYGL 211

  Fly   217 D-------GGWPSIFYIFGLFSTIWCIIFICLVQESPAVSTRISEAERRHIMEAIWQAQPEERSR 274
            .       .||..||.|.|:.:.....:.:.:|.::|..:..::|.:|:.::         :|.|
pombe   212 AKRTSLPMRGWKLIFIICGVLAIFLGFVILAVVPDNPFKAWFLTEEDRKLVV---------KRLR 267

  Fly   275 IPFLGIAKSPPFYAILVAHAGHN----YGYETLMTMLPTYMYRVLNV--NIRTNGIISSLPYLAM 333
            ....|:              |:|    |.::..|..:.|::..|.:|  ||...||         
pombe   268 ANKQGV--------------GNNHFKLYQFKETMLDIRTWIMFVSSVLLNIPNGGI--------- 309

  Fly   334 WILAIVFGILADCLIRRNFSITVVRKLMNSLGQYGPAVA-----LISVG----FVHHSLWL---T 386
                   |..:..||:.......::.|:..|    ||.|     ||:.|    |:|..:.|   |
pombe   310 -------GTFSSLLIKGTMGYDTLQTLLMGL----PAGACEFGGLIAFGFLSLFIHKRMVLATIT 363

  Fly   387 SVIFILG------MGLNGAIYCGFKINHLDLSP-----RFA---------------GLLISVTNC 425
            :.|.::|      .|...|...|:.:  |.:||     .||               |::..:..|
pombe   364 TCIALIGSCLLSFAGPPRAQLAGYYL--LMVSPGAMIVMFAIISSNASGYTKKVTVGVIYLIGYC 426

  Fly   426 VANLVGLMAPMV--AGHVIDPKPSVENWRIVFYIAAGVFIFTASFYNVFASGKQQ 478
            |.||:|   |..  |....:..|: :|..:..| ||.:..|.|.:|..:...|::
pombe   427 VGNLIG---PQTFKAADAPEYMPA-KNTMVGCY-AATLVTFPALYYVNWRENKRR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 95/443 (21%)
MFS 45..473 CDD:119392 94/438 (21%)
SPCC417.10NP_588287.1 MFS 66..436 CDD:119392 85/401 (21%)
2A0114 71..468 CDD:273326 93/435 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
TreeFam 00.000 Not matched by this tool.
44.050

Return to query results.
Submit another query.