DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and F56A4.12

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001303741.1 Gene:F56A4.12 / 186355 WormBaseID:WBGene00018920 Length:465 Species:Caenorhabditis elegans


Alignment Length:452 Identity:118/452 - (26%)
Similarity:184/452 - (40%) Gaps:51/452 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PRCRKTRFFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERD-------GDFE 92
            |:.|||..||    |......|:|...::......:|....:.|....:....|       .|..
 Worm    14 PQIRKTSSFV----FWNRTRLYIMVLTLACLTFIQMNTLTFNFTVICMEDIVEDYNLLTNYTDTH 74

  Fly    93 WSYK--LQGYILSSFFYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIPISARSGGVVGL 155
            |..:  .:..:.|....|.:|..||...:|...|..:......:|::..||..|::...|....|
 Worm    75 WFERNTEKSLLFSGAAIGGLIGLIPAVPLISSLGLGNVQTISGIISAFGAFLFPLAVSIGFYTSL 139

  Fly   156 CVVRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGLLAHYGFDGGW 220
             :.|.:||:|...:......:...|.|.||.:...|.:....|...|:.||:||||.....  ||
 Worm   140 -LCRILQGVGSAIMFTTVGVVPGVWAPSNEANTFMAILSCALQLSNIICMPVSGLLCESAL--GW 201

  Fly   221 PSIFYIFGLFSTIWCIIFICLVQESPAVSTRISEAERRHI----MEAIWQAQPEERSRIPFLGIA 281
            .||:|:||..:.|..|:|.....:.|.:...:|:.|...|    :|.|       :..:|:|.|.
 Worm   202 RSIYYLFGGLTFIIYIVFWFTYSDDPKLHRNVSQKELGKISTGKIEKI-------KEPVPYLAIC 259

  Fly   282 KSPPFYAILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGIISSLPYLAMWILAIVFGILADC 346
            ..|.......:..|.|..:..|....|||:..:|..::|..|.:|:||::...|:....|.|:| 
 Worm   260 TDPTVLITWTSCFGGNMAFFALSLYGPTYLREILKFDVRETGFLSALPFILSAIVKFGAGQLSD- 323

  Fly   347 LIRRNFSITVVR-KLMNSLGQYGPAVALISVGFVHHSLWLTSVIF---ILGMGLN--GAIYCGFK 405
              |..|.....| ....:..|.|.||.|:.:.|....| :..:.|   |:..|||  |.|.|   
 Worm   324 --RMTFLSEKARFVFFAATSQIGFAVGLVVMAFTSDRL-IAQIAFNFAIVSSGLNIMGVIKC--- 382

  Fly   406 INHLDLSPR----FAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVENWRIVFYIAAGVFI 463
               :.|..|    ||..:||.|   |.:|..:||::.. :|.|..:.|.|.|:|....||.|
 Worm   383 ---IQLRCRQHVHFAIAVISFT---AYVVQFLAPIIVS-IICPDNTPEQWTILFLFITGVII 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 117/449 (26%)
MFS 45..473 CDD:119392 112/442 (25%)
F56A4.12NP_001303741.1 MFS 81..443 CDD:391944 104/381 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160288
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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