DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and F56A4.10

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001303739.1 Gene:F56A4.10 / 186353 WormBaseID:WBGene00018918 Length:470 Species:Caenorhabditis elegans


Alignment Length:463 Identity:104/463 - (22%)
Similarity:185/463 - (39%) Gaps:69/463 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QIPRCRKTRFFVVLMLFSGMANAYVM-RTNMSVAIVAM----VNHTAIS-----------HTKSS 81
            :.|:.|||..||    |......||| .|.:.:..:.|    :|.|.|.           |..:.
 Worm    18 EFPQVRKTSSFV----FWNRTRIYVMVLTLICLTFMQMNTLTLNFTVICMDDIVEDFHMFHNSTE 78

  Fly    82 TQSKERDGDFEWSYKLQGYILSSFFYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIPIS 146
            |...||..:       :..:.|....|.:|..:|....|...|.|:.......|:.|.:|..|::
 Worm    79 THWFERSTE-------KSLLFSGVAIGGLIGLVPSVPQISSIGLRNTQTISGFISGLGSFLFPLA 136

  Fly   147 ARSGGVVG-LCVVRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGL 210
            ...|.... ||  |.:||:|...:......:...|.|.:|.:...:.:....|...::.||:|||
 Worm   137 VSVGFYTSFLC--RVLQGIGAAVLFTAVGVVPGVWAPKSEANTFMSILACAFQLSNVICMPVSGL 199

  Fly   211 LAHYGFDGGWPSIFYIFGLFSTIWCIIFICLVQESPAVSTRISEAERRHI----MEAIWQAQPEE 271
            |.....  ||.||:||.|..:.:...:|.....:.|.:...:|:.|.|.|    :|.|       
 Worm   200 LCESAV--GWRSIYYISGAITFVLYTVFWFTYTDDPKLHRNVSQKELRKISTGKVEKI------- 255

  Fly   272 RSRIPFLGIAKSPPFYAILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGIISSLPYLAMWIL 336
            :..:|:..::..|......::..|.|.|:..|....|||:..||..:::..|.:::||::...|.
 Worm   256 KEPVPYFAVSTDPTVIISWISLFGGNMGFYVLCIYGPTYLREVLKFDVKETGFLTALPFILSAIA 320

  Fly   337 AIVFGILADCLI----RRNFSITVVRKLMNSLGQYGPAVALISVGFVHHSLWLTSVIF---ILGM 394
            ....|.::|.|.    |..|      ....|:.|.|....|:.:.|..:.: :..:.|   |:..
 Worm   321 KFSAGRISDKLTGLSERARF------VFFASIFQIGLVAGLVVMAFTTNRV-IAQIAFNFAIVSS 378

  Fly   395 GLN--GAIYCGFK--INHLDLSPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVENWRIVF 455
            |||  |.:.|...  :.|:..:       ::|.:..|.....::|.:.. :|.|..:.|.|:..|
 Worm   379 GLNIMGVVKCVQLRCLQHVHYT-------LTVMSFTAYASQFLSPTLVS-IICPNYTNEQWKTFF 435

  Fly   456 YIAAGVFI 463
            .:.:|:.:
 Worm   436 LVISGLIV 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 103/458 (22%)
MFS 45..473 CDD:119392 98/451 (22%)
F56A4.10NP_001303739.1 MFS 52..453 CDD:391944 92/425 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160284
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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