DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and C18D1.2

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_496174.2 Gene:C18D1.2 / 182781 WormBaseID:WBGene00007669 Length:478 Species:Caenorhabditis elegans


Alignment Length:469 Identity:103/469 - (21%)
Similarity:205/469 - (43%) Gaps:54/469 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 KTRFFVVL--MLFSGMANAYVMRTNMSVAIVAMV-NHTAISHTKSSTQ------SKERDGDFEWS 94
            :||||::.  :|...::.:..:..|.::..::.: |.||...::.||.      .|.....:.::
 Worm    13 RTRFFILFLCLLCLSISQSNTLTLNFTIICMSTLHNFTATEASEKSTNVLDFMLHKILQKTYVYT 77

  Fly    95 YKLQGYILSSFFYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIPISARSGGVVGLCVVR 159
            ......:.|:...|.:....||..:|:..|:|..:.:..:.::.....||.:|.. |...|..:|
 Worm    78 ASQSNLLFSAVAIGAMCAVYPFMYIIQKKGSRSVVTFVGLFSAATTAMIPWAAYL-GFYPLLAMR 141

  Fly   160 FIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGLLAHYGFDGGWPSIF 224
            |:||:|..........:..||....:.:...|.:....|.|.|.:||::.......|  |||:::
 Worm   142 FLQGIGLSTGFTLIGIVTRQWSMQVQGAFFFACLSCFFQIGPIFTMPVASAFCTSSF--GWPAVY 204

  Fly   225 YIFGLFSTIWCIIFICLVQESPAVSTRISEAERRHIMEAIWQAQPE-ERSRIPFLGIAKSPPFYA 288
            |...:.:....::|..|.:|||...|.::|.|    :..|.:.:.| :|.|:|.:.|.:.|...:
 Worm   205 YTHSIVTIFIFLLFFTLYRESPVFHTIVTELE----LSKIQRGKGETKRQRVPLVQILRDPVVLS 265

  Fly   289 ILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGIISSLPYLAMWILAIVFGILAD---CLIRR 350
            |......:..|.:..|...|||::::|..:::..|..|:||.:....:.:..|..||   |...:
 Worm   266 IWTTALANFMGIQLTMQFTPTYLHKILGFSVQDTGPFSALPQVITAFVKVSAGYSADKLQCCTPK 330

  Fly   351 NFSITVVRKLMNSLGQYGPAVALISVGFVHHSL-WLTSVIFILGMGLNG----------AIYCGF 404
                |.|| :.|||...|.:...:.:..:..|: :|...:.||...:.|          |||.. 
 Worm   331 ----TSVR-IFNSLALGGMSFMFVGLAIIPTSMPYLGLFMLILSCSIIGFNCGGFFRCSAIYAA- 389

  Fly   405 KINHLDLSPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVENWRIVFYI--AAGVFIFTAS 467
            :.||      |...:.|..||:|   .|:||::....::.    :.|...:::  :..|.:|.::
 Worm   390 QHNH------FVMGMNSFLNCLA---ALLAPVIVNIFVEN----DTWNEWYWVWMSHFVILFLSN 441

  Fly   468 F-YNVFASGK-QQW 479
            . :.::|.|: .:|
 Worm   442 LVFQIYAKGEPAEW 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 102/466 (22%)
MFS 45..473 CDD:119392 96/454 (21%)
C18D1.2NP_496174.2 MFS 36..448 CDD:391944 95/437 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160303
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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