DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and Y4C6B.3

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001293768.1 Gene:Y4C6B.3 / 177313 WormBaseID:WBGene00021157 Length:459 Species:Caenorhabditis elegans


Alignment Length:477 Identity:107/477 - (22%)
Similarity:202/477 - (42%) Gaps:83/477 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERDGD----FEWSYKLQGYIL 102
            |.||::..|.|....|      .|...::|.|.|......:|::..:|.    ::::...:.:||
 Worm     9 FRVVIVFISFMCLVSV------CANYIIINFTFICMKDDFSQTRIINGTIRSMYDYTPTEKKHIL 67

  Fly   103 SSFFYGYVITQIPFGLMIKYYGAR-HFLGWGMMINSLAAFFIPISARSGGVVGLCVVRFIQGLGE 166
            .:..:|.::...|..::....||| .|...| :::::...|.|.:| |..:..|..:||:||:..
 Worm    68 WAVSFGTIVGIFPINMLYVQCGARLAFFSAG-LLSAMTTAFTPWAA-SQSMWFLVALRFLQGVAY 130

  Fly   167 GPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGLL--AHYGFDGGWPSIFYIFG- 228
            .........::::|.|.:|.::..|.:.:.....:|::..:||::  :|.    ||...||:.. 
 Worm   131 SADFAAIGIIISKWAPLDETAVFIATLTSFTAISSIITNGVSGVICESHL----GWRWSFYLHAA 191

  Fly   229 ----LFSTIWCIIFICLVQESPAVSTRISEAERRHIMEAIWQAQPEERSRIPFLGIAKSPPFYAI 289
                :|.| |.:::    :..|::...:|..|...|.:....|..::..:||:..|..||....:
 Worm   192 ACLIVFLT-WGLVY----KNDPSLHKSVSAKELGKIQKNKSDAHMKDSMQIPYRKIFTSPVVITV 251

  Fly   290 LVAHAGHNYGYETLMTML------PTYMYRVLNVNIRTNGIISSLPYLAMWILAI------VFGI 342
            .:.      .:..|.|::      |.|...||..:|:..|.     ||.: ||||      |..:
 Worm   252 WLC------AFTELSTLILIATYAPIYFRNVLKFDIKMIGF-----YLGL-ILAIHLPFRFVCAL 304

  Fly   343 LADCLIRRNFSITVVRK--LMNSLGQYGPAVALISVGFVHHSLWLTSVIFILGMGLNGAIYC--- 402
            |:|    :...|:.:.|  :.|:|......::.|:.|.:.|...|::||.:      |.:.|   
 Worm   305 LSD----KTRCISEMSKIHIFNTLSVGFVGISFIAFGQIPHEHNLSAVICL------GVLECFTS 359

  Fly   403 ----GF-KINHLDLSPRFAGLLISV---TNCVANLVGLMAPMVAGHVIDPKPSVENWRIVFYIAA 459
                || |...|. :.:|:.::||.   |.|:|...|   |.:....:..:.:...|..||...|
 Worm   360 FSSGGFYKCGTLH-ARQFSSIVISAIQFTKCIALFSG---PALVAFFVTDESNQTQWSHVFMTLA 420

  Fly   460 GVFIFTASF--YNVFASGKQQW 479
            | |.|.|:.  |..|.....:|
 Worm   421 G-FTFFANILSYIYFTDQPAEW 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 106/474 (22%)
MFS 45..473 CDD:119392 103/466 (22%)
Y4C6B.3NP_001293768.1 MFS 15..433 CDD:391944 102/461 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160331
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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