DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and Y4C6B.4

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_741396.1 Gene:Y4C6B.4 / 177312 WormBaseID:WBGene00021158 Length:458 Species:Caenorhabditis elegans


Alignment Length:473 Identity:99/473 - (20%)
Similarity:194/473 - (41%) Gaps:76/473 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERDGD----FEWSYKLQGYIL 102
            |.::::|.|.|....|....:      ::|.|.|......:|:.|.:|.    ::::...:.|||
 Worm     9 FRIIIVLLSFMCLVSVCSNYI------IINFTFICMKDDLSQTTEVNGTLKSIYDYTPTEKKYIL 67

  Fly   103 SSFFYGYVITQIPFGLMIKYYGAR-HFLGWGMMINSLAAFFIPISARSGGVVGLCVVRFIQGLGE 166
            .:..:|.::...|..::...|||| .|...| :::::.....|.:|.....: ...:||:||:..
 Worm    68 WAVAFGTMVGTFPINILYVKYGARIPFFSAG-VLSAVTTGLTPWAAAQSMWI-FVALRFLQGVAY 130

  Fly   167 GPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGLLAHYGFDGGWPSIFYIFGLFS 231
            .........::::|.|.:|.::..|.:.:.....:|::...||::..   ..||...||    |.
 Worm   131 SADFAAIGIVISKWAPLDETAIFIATLTSFTSIASIITNGASGVICD---TLGWQWSFY----FH 188

  Fly   232 TIWCIIFIC----LVQESPAVSTRISEAERRHIMEAIWQAQPEERSRIPFLGIAKSPPFYAILVA 292
            :..|::..|    :.|:.|.....:|..|...|.:...:|..:...::|:..|..||....:.:.
 Worm   189 SATCLLIFCCWVLIYQDDPTFHKSVSVKELGWIQKNKSEAHIKVGMKVPYKAIFTSPVVLTVWLC 253

  Fly   293 HAGHNYGYETLMTML------PTYMYRVLNVNIRTNGIISSLPYLAMWI-LAIVFGILADCLIRR 350
                  .:..|.|::      |.|...||..:|:..|.     ||.:.| :.:.|..:...|..:
 Worm   254 ------AFTELSTLILIATYGPIYFRSVLGFDIKIIGF-----YLGIMIAIHLPFRFVCAFLSDK 307

  Fly   351 NFSITVVRK--LMNSLGQYGPAVALISVGFV-------HHSLWLTSVIFILGMGL---NGAIY-C 402
            ...|:.:.|  :.|:|     ||..:.:.|:       .|::.....:.||...:   :|..| |
 Worm   308 TKCISEMGKIHIFNTL-----AVGFVGISFLIFGKIPPEHNISAVVCLAILECFISFNSGGFYKC 367

  Fly   403 GFKINHLDLSPR-FAGLLISV---TNCVANLVGLMAPMVAGHVIDPKPSVENWRIVFYIAAGVFI 463
            |      .|..| |:.::||.   |.|::...|   |.:....:..:.:...|..||...|| |.
 Worm   368 G------TLHARQFSSIVISAIQFTKCISLFSG---PALVAFFVTDESNQTQWSHVFMTLAG-FS 422

  Fly   464 FTASFYN-VFASGK-QQW 479
            |.|:..: :|.:.| .:|
 Worm   423 FVANILSFIFFTDKPAKW 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 98/470 (21%)
MFS 45..473 CDD:119392 95/461 (21%)
Y4C6B.4NP_741396.1 MFS 15..432 CDD:391944 95/457 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160332
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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