DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and vglu-3

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_499277.1 Gene:vglu-3 / 176442 WormBaseID:WBGene00011556 Length:544 Species:Caenorhabditis elegans


Alignment Length:447 Identity:131/447 - (29%)
Similarity:222/447 - (49%) Gaps:26/447 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RKTRFFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERDGDFEWSYKLQGYIL 102
            ||.|:.:.::...|.|.::.:|:|..||...|||    :.|.:..:..||  :|.|:....|.:.
 Worm    44 RKVRWQIAILAHFGFAISFGIRSNFGVAKNRMVN----NFTDAYGEVHER--EFLWTGAEVGMME 102

  Fly   103 SSFFYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIPISARSGGV-----VGLCVVRFIQ 162
            |||||||..:|||.|::...:........|:::   |:|...:||.|...     :.:.||:.:|
 Worm   103 SSFFYGYAASQIPAGVLAAKFAPNKIFMLGILV---ASFMNILSAISFNFHPYTDIFVMVVQAVQ 164

  Fly   163 GLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSG-LLAHYGFDGGWPSIFYI 226
            ||..|.:.|..|.:...|.||.|||......:.|:..|.:..:|.|. |::|:    .|.:.||:
 Worm   165 GLALGVLYPAMHGVWKFWAPPLERSKLATTAFTGSSVGVMTGLPASAYLVSHF----SWSTPFYV 225

  Fly   227 FGLFSTIWCIIFICLVQESPAVSTRISEAERRHIMEAIWQAQPEERS--RIPFLGIAKSPPFYAI 289
            ||:...||.:|::.:...||.....||:.|::.:.|.|.....:..|  .:|:..:..|...:||
 Worm   226 FGVVGIIWSLIWMYVSSHSPETHGYISDDEKKQVTEKIGDVAVKNMSLTTLPWRDMMTSSAVWAI 290

  Fly   290 LVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGIISSLPYLAMWILAIVFGILADCL-IRRNFS 353
            ::.....::|:..|:....|||..||:::|:.:|.||..|...|.|:.:..|.|.|.| .....|
 Worm   291 IICTFCRSWGFFLLLGNQLTYMKDVLHIDIKNSGFISIFPQFGMCIVTLATGQLCDYLRSSGKMS 355

  Fly   354 ITVVRKLMNSLGQYGPAVALISVGFVHHSLWLTSVIFILGMGLNGAIYCGFKINHLDLSPRFAGL 418
            ...|||.:|:.|....|:.|..:.||...:...:.:.|...| :|::..||.:||.|::||:|.:
 Worm   356 TEAVRKSVNTFGFTVEAMMLGCLAFVRDPVIAVTCLVIACTG-SGSVLSGFNVNHFDIAPRYAPI 419

  Fly   419 LISVTNCVANLVGLMAPMVAGHVIDPKPSVENWRIVFYIAAGVFIFTASFYNVFASG 475
            |:.:.|.:..:.| :..||...|....|  :.|:.||.:|..:.||...|:.:||.|
 Worm   420 LMGIANGLGAVAG-VGGMVTNTVTYQNP--DGWKWVFLLAMAIDIFGVIFFLIFAKG 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 131/447 (29%)
MFS 45..473 CDD:119392 125/436 (29%)
vglu-3NP_499277.1 2A0114euk 47..485 CDD:129972 129/444 (29%)
MFS 52..471 CDD:119392 125/435 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160215
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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