DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and vglu-3

DIOPT Version :10

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_499277.1 Gene:vglu-3 / 176442 WormBaseID:WBGene00011556 Length:544 Species:Caenorhabditis elegans


Alignment Length:78 Identity:17/78 - (21%)
Similarity:25/78 - (32%) Gaps:30/78 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 HSKGPSPYLTASSSVINQRESNRLESFSLNCPHVVDSSNKNVHIEVVWTLNETVWLKIEKGHQRV 112
            |...|.|..|..|....:|..:|.|       |:.....|.:|                  .||:
 Worm    30 HQARPEPVHTVCSKPPLKRPPSREE-------HLRQRLVKTIH------------------SQRI 69

  Fly   113 VNGESTFNKRRVS 125
            ::|     |.|:|
 Worm    70 ISG-----KNRLS 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 MFS_SLC17 46..473 CDD:340876 17/78 (22%)
vglu-3NP_499277.1 MFS 51..471 CDD:475125 11/57 (19%)

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