DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and vglu-2

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_499276.1 Gene:vglu-2 / 176441 WormBaseID:WBGene00010755 Length:573 Species:Caenorhabditis elegans


Alignment Length:457 Identity:126/457 - (27%)
Similarity:215/457 - (47%) Gaps:46/457 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RKTRFFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERDGDFEWSYKLQGYIL 102
            ||.|:.:.|:...|.|.::.:|:|..||...|:|:.      :....:..:.:|.|:....|.:.
 Worm    44 RKVRWQIALLAHFGFAISFGIRSNFGVAKNRMINNF------TDAYGEVHEKEFFWTGTEVGMME 102

  Fly   103 SSFFYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIPISARSGGVVGLC----------- 156
            |||||||..:|||.|::...:........|::..||...          |..:|           
 Worm   103 SSFFYGYAASQIPAGVIAAKFAPNKLFMLGILFASLLNI----------VTAICLNFHPFTDIFV 157

  Fly   157 -VVRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSG-LLAHYGFDGG 219
             |::.:|||..|...|..|.:...|.||.|||......:.||..|.:|.:|.|. |::|:    .
 Worm   158 MVIQVMQGLALGVCYPAMHGVWKYWAPPLERSKLATTTFTGASVGVMVGLPASAYLVSHF----S 218

  Fly   220 WPSIFYIFGLFSTIWCIIFICLVQESPAVSTRISEAERRHIMEAIWQAQPEER--SRIPFLGIAK 282
            |.:.||:||....:|.|::|.:...||.....||..|:::|.|.:.....:..  :.:|:..:..
 Worm   219 WSTPFYVFGALGIVWSILWIYVSGTSPETHGYISADEKKYITEKVGSVAVKNMTLTTLPWRDMMT 283

  Fly   283 SPPFYAILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGIISSLPYLAMWILAIVFGILADCL 347
            |...:||::.....::.:..|:....|||..||:::|:.:|:|:..|.|.|.|:.:..|.|:|.|
 Worm   284 STAVWAIIICSFCRSWSFFLLLGNQLTYMKDVLHIDIKNSGLIAIFPQLGMCIVTLTSGQLSDYL 348

  Fly   348 -IRRNFSITVVRKLMNSLGQYGPAVALISVGFVHHSLWLTSVIFILGMGLNGAIYCGFKINHLDL 411
             .....|...|||.:|:.|....||.|..:.||...:...:.:.|...|. ||:..||.:||.|:
 Worm   349 RSSGKMSTEAVRKSVNTFGFTVEAVMLGCLAFVRDPVIAVTFLIIACSGA-GAVLSGFNVNHFDI 412

  Fly   412 SPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVEN---WRIVFYIAAGVFIFTASFYNVFA 473
            :||.|.:|:.:.|.:..:.|:      |.::....:.:|   |:.||.:|..:.||...|:.:||
 Worm   413 APRHAPILMGIANGLGAIAGV------GGIVTNSLTYQNPDGWQWVFLLAMSIDIFGIIFFLIFA 471

  Fly   474 SG 475
            .|
 Worm   472 KG 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 126/457 (28%)
MFS 45..473 CDD:119392 120/446 (27%)
vglu-2NP_499276.1 MFS 51..458 CDD:391944 117/433 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160217
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

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