DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and vglu-2

DIOPT Version :10

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_499276.1 Gene:vglu-2 / 176441 WormBaseID:WBGene00010755 Length:573 Species:Caenorhabditis elegans


Alignment Length:457 Identity:126/457 - (27%)
Similarity:215/457 - (47%) Gaps:46/457 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RKTRFFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERDGDFEWSYKLQGYIL 102
            ||.|:.:.|:...|.|.::.:|:|..||...|:|:.      :....:..:.:|.|:....|.:.
 Worm    44 RKVRWQIALLAHFGFAISFGIRSNFGVAKNRMINNF------TDAYGEVHEKEFFWTGTEVGMME 102

  Fly   103 SSFFYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIPISARSGGVVGLC----------- 156
            |||||||..:|||.|::...:........|::..||...          |..:|           
 Worm   103 SSFFYGYAASQIPAGVIAAKFAPNKLFMLGILFASLLNI----------VTAICLNFHPFTDIFV 157

  Fly   157 -VVRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSG-LLAHYGFDGG 219
             |::.:|||..|...|..|.:...|.||.|||......:.||..|.:|.:|.|. |::|:    .
 Worm   158 MVIQVMQGLALGVCYPAMHGVWKYWAPPLERSKLATTTFTGASVGVMVGLPASAYLVSHF----S 218

  Fly   220 WPSIFYIFGLFSTIWCIIFICLVQESPAVSTRISEAERRHIMEAIWQAQPEER--SRIPFLGIAK 282
            |.:.||:||....:|.|::|.:...||.....||..|:::|.|.:.....:..  :.:|:..:..
 Worm   219 WSTPFYVFGALGIVWSILWIYVSGTSPETHGYISADEKKYITEKVGSVAVKNMTLTTLPWRDMMT 283

  Fly   283 SPPFYAILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGIISSLPYLAMWILAIVFGILADCL 347
            |...:||::.....::.:..|:....|||..||:::|:.:|:|:..|.|.|.|:.:..|.|:|.|
 Worm   284 STAVWAIIICSFCRSWSFFLLLGNQLTYMKDVLHIDIKNSGLIAIFPQLGMCIVTLTSGQLSDYL 348

  Fly   348 -IRRNFSITVVRKLMNSLGQYGPAVALISVGFVHHSLWLTSVIFILGMGLNGAIYCGFKINHLDL 411
             .....|...|||.:|:.|....||.|..:.||...:...:.:.|...|. ||:..||.:||.|:
 Worm   349 RSSGKMSTEAVRKSVNTFGFTVEAVMLGCLAFVRDPVIAVTFLIIACSGA-GAVLSGFNVNHFDI 412

  Fly   412 SPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVEN---WRIVFYIAAGVFIFTASFYNVFA 473
            :||.|.:|:.:.|.:..:.|:      |.::....:.:|   |:.||.:|..:.||...|:.:||
 Worm   413 APRHAPILMGIANGLGAIAGV------GGIVTNSLTYQNPDGWQWVFLLAMSIDIFGIIFFLIFA 471

  Fly   474 SG 475
            .|
 Worm   472 KG 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 MFS_SLC17 46..473 CDD:340876 120/445 (27%)
vglu-2NP_499276.1 MFS 51..458 CDD:475125 117/433 (27%)

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