DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6978 and vnut-1

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_497007.1 Gene:vnut-1 / 175106 WormBaseID:WBGene00010758 Length:445 Species:Caenorhabditis elegans


Alignment Length:459 Identity:107/459 - (23%)
Similarity:200/459 - (43%) Gaps:41/459 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GQIPRCRKTRFFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERDGDFEWSYK 96
            |:|....::|.:.:.| |||....|..|.::.::..|:..                  :|.|:..
 Worm    13 GKIWTRAESRMWTITM-FSGTCVLYASRASLPISAAAVAK------------------EFAWNKT 58

  Fly    97 LQGYILSSFFYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIP-----ISARSGGVVGLC 156
            ..|.:||.||:||.:||:..|.:...|||...|.:..:..::..||.|     ....:..:|.|.
 Worm    59 DSGTVLSCFFWGYALTQVFAGRIADKYGAEKILPYSSLAWTMLTFFTPHLFDFAYWTNYPLVVLL 123

  Fly   157 VVRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGLLAHYGFDGGWP 221
            .||.:.|:.:...:|...|::::.:...::......|.||:.:||:::..:..:|..:   .||.
 Worm   124 AVRILTGVCQAFHIPSLASIVSKHLAAADKGRVFGIVLAGSHWGTVLAGAIGSILIEW---IGWR 185

  Fly   222 SIFYIFGLFSTIWCIIFICLVQESPAVSTRISE-------AERRHIMEAIWQAQPEERSRIPFLG 279
            ::|...|:.|.|||.:|..::..:.....|.|.       .:::|.......|.......:|:..
 Worm   186 ALFQFVGIISLIWCWVFRWVLDRAKGPGGRSSPLPDEEVLLDKKHDTIESHLAATSPCPSVPWGT 250

  Fly   280 IAKSPPFYAILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGII-SSLPYLAMWILAIVFGIL 343
            :.:.|.|:|..||.......|..|...||:|.:.....   ..|.: :.:|.||:.:.::|..::
 Worm   251 LFRHPAFWAAAVAQYTGGNSYSILFNWLPSYFHETFPT---AKGFVYNVVPSLAIVVTSLVAPVM 312

  Fly   344 ADCLIRRNFSITVVRKLMNSLGQYGPAVALISVGFVHHSLWLTSVIFILGMGLNGAIYCGFKINH 408
            |...:....::|..||||......|.|..|:.|... .|.|::.:||.:.|...|..:.|..:|.
 Worm   313 ASRALSEGKTVTYTRKLMEGASLLGIAFCLMLVPMT-SSFWISLIIFTMAMAARGLHHGGVSVNP 376

  Fly   409 LDLSPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVENWRIVFYIAAGVFIFTASFYNVFA 473
            .|.:|..||.:..|.|....:.|.:...:|||:::  .:..||..||.:.|...:..|..|.:..
 Worm   377 HDFAPNHAGSVFGVFNACGAITGFVGVYIAGHILE--ATNNNWSYVFVVTAAQCVVGAMVYTLLG 439

  Fly   474 SGKQ 477
            :|::
 Worm   440 TGQK 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 105/453 (23%)
MFS 45..473 CDD:119392 103/440 (23%)
vnut-1NP_497007.1 MFS_SLC17A9_like 25..439 CDD:340938 103/441 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.