DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and F41C3.2

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_494849.2 Gene:F41C3.2 / 173821 WormBaseID:WBGene00018268 Length:499 Species:Caenorhabditis elegans


Alignment Length:507 Identity:120/507 - (23%)
Similarity:209/507 - (41%) Gaps:77/507 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SKGVSNRNR---SDQEVRMERYASDGQIPRCRKTRFFVVLMLFSGM----ANAYVMRTNMSVAIV 67
            ||.:|..:.   ||:|. :|  |...:||  .:.|:::..::...|    ||.:|.  |.:|..:
 Worm     5 SKSISVEDLHQFSDEEY-VE--AKQKKIP--GRMRWYICAIVTGLMTLVQANVHVY--NFTVLCM 62

  Fly    68 ----AMVNHTAISHTKSSTQSKERDGDFEWSYKLQGYILSSFFYGYVITQIPFGLMIKYY----- 123
                ...|:.::|..::...|..   :|.:| |.:..:|.|..|   |..:| .::|.|:     
 Worm    63 QEEQEKANNESLSRNETILPSSL---NFNFS-KFEQDLLFSAAY---IAPLP-SIIILYFLTNRS 119

  Fly   124 GARHFLGWGMMINSLAAFFIPISARSGGVVGLCVVRFIQGLGEG------PIVPCSHSLLAQWVP 182
            |.:.......|::.|:....|| |...|.......||.|||...      .:|.|      .|..
 Worm   120 GVKTTFLICSMLSFLSTILTPI-ATQYGFWFFWAARFFQGLPTAILGIVVSVVTC------HWST 177

  Fly   183 PNERSLAGAAVYAGAQFGTIVSMPLSGLLAHYGFDGGWPSIFYIFGLFSTIWCIIFICLVQESPA 247
            ..|.....:.:.|..|...:::||||.|:...   |||.|::|..|..:.|..::|.....:.|:
 Worm   178 LTENGTYVSILAAHYQIAPLLTMPLSALMCSV---GGWSSVYYTQGTITAILIVLFAVFYTDKPS 239

  Fly   248 VSTRISEAERRHIMEA-IWQAQPEERSRIPFLGIAKSPPFYAILVAHAGHNYGYETLMTMLPTYM 311
            .|..:|:.|.:.|.:. ..:.:..|:|:.||:.|.|.|..:||.:...|...|:...:...|||:
 Worm   240 ESKFVSKGELKAIEDGKSLEEKHVEKSKTPFVAIHKDPAVWAIWITSVGGTIGFSIFLQYGPTYL 304

  Fly   312 YRVLNVNIRTNGIISSLPYLAMWILAIVFGIL-ADCLIRRNFSITVVRKLMNSLGQYGPAVALIS 375
            .:||:.|:.|.|..:::||:...|..||...| |:|.........:|   ..::.|...|:..:.
 Worm   305 NKVLHYNLSTTGWTAAVPYIFSCIARIVAQPLSANCSFLGERLAAIV---TTTISQGTMAICFLV 366

  Fly   376 VGFVHHSLW-----LTSVIFILGMGLNGA-------IYCGFKINHLDLSPRFAGLLISVTNCVAN 428
            :.|:..: |     |...:.|:..||||.       :.|...::.:..:..|..          .
 Worm   367 LMFIPQT-WSSVGQLCYSLVIVANGLNGVGITRSAQLVCKQHMSFVYTARAFYN----------G 420

  Fly   429 LVGLMAPMVAGHVIDPKPSVENW-RIVFYIAAGVFIFTASFYNVFASGKQQW 479
            .|||..|::...|. |..:...| |:...|...||:....|....::...||
 Worm   421 SVGLFLPLLVNFVA-PNDTHNEWTRLFLIIFCIVFVSNLIFIAFSSTEPAQW 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 108/473 (23%)
MFS 45..473 CDD:119392 107/461 (23%)
F41C3.2NP_494849.2 2A0114euk 30..471 CDD:129972 109/477 (23%)
MFS 86..463 CDD:119392 98/406 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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