DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6978 and slc-17.6

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_490947.2 Gene:slc-17.6 / 171781 WormBaseID:WBGene00017398 Length:546 Species:Caenorhabditis elegans


Alignment Length:453 Identity:121/453 - (26%)
Similarity:203/453 - (44%) Gaps:32/453 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 RFFVVLMLFSGMANAYVMRTNMSVAIVAMVNHTAISHTKSSTQSKERDGDFEWSYKLQGYILSSF 105
            ||...|::.:......:|||...:|:|.:|        :|...:...|...|||...|..|.:||
 Worm    26 RFQTALLISAACVVFGLMRTCFGMAMVDIV--------RSGNGTFHPDLHMEWSGDEQANIHTSF 82

  Fly   106 FYGYVITQIPFGLMIKYYGARHFLGWGMMINSLAAFFIPISA---RSGGVVGLCVVRFIQGLGEG 167
            :.|..|...|...:.|..|.::.|.:.:::|...:...|.||   ||  ...:..:|.|.|.|.|
 Worm    83 YIGAFIAVFPSEFLAKKLGPKNLLSFALLLNIFGSLLTPFSAIYLRS--YFPVAAIRLIMGFGYG 145

  Fly   168 PIVPCSHSLLAQWVPPNERSLAGAAVYAGAQFGTIVSMPLSGLLAHYGFDGGWPSIFYIFGLFST 232
            .::|....|::.|.|.:|:|.|.|....|.|.|..|||.|:..|....|..|||.:|.::||...
 Worm   146 FVIPAGSVLISSWFPLSEKSTAMAIFTTGNQIGIAVSMFLTAKLCQLHFFEGWPLVFIVYGLIGA 210

  Fly   233 IWCIIFICLVQESPAVSTRISEAE---------RRHIMEAIWQAQPEERSRIPFLGIAKSPPFYA 288
            ::.:|:...:.:.|..|..|:..|         ||:..|.|.:|       .|::.|..:....|
 Worm   211 VFLVIWHVRLADKPRESKYITATELTYIKGGKQRRNRAETIVRA-------TPYMKIILNGCVCA 268

  Fly   289 ILVAHAGHNYGYETLMTMLPTYMYRVLNVNIRTNGIISSLPYLAMWILAIVFGILADCLIRRNFS 353
            |.......::....|:|.||.|......:|:..|||.||||:....|..::|.|:||.:.:|..:
 Worm   269 ICACSFAQSFVLVALVTYLPKYNQIAFKMNLTHNGIWSSLPFFIQMITKLLFAIIADKVKQRKVN 333

  Fly   354 ITVVRKLMNSLGQYGPAVALISVGF-VHHSLWLTSVIFILGMGLNGAIYCGFKINHLDLSPRFAG 417
            .|.|.|:.|::..:..|:.::...: ...|..|..:..|:.|....|...|:..:.:.::|:|..
 Worm   334 ATAVTKVSNAIASFASAIFIVIAAYGPFDSAELVQLSIIVSMAAFSAYVPGYNTSIVTVAPQFTA 398

  Fly   418 LLISVTNCVANLVGLMAPMVAGHVIDPKPSVENWRIVFYIAAGVFIFTASFYNVFASGK-QQW 479
            .:.|.....|.:...:||:|.|. |....::..|:..||..|||...|...:.:|..|: :.|
 Worm   399 FISSYAQLYAQIASTLAPIVIGR-ITSHGTIYEWKCAFYSLAGVLAVTGLIFQIFGHGRTEPW 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 120/450 (27%)
MFS 45..473 CDD:119392 116/440 (26%)
slc-17.6NP_490947.2 MFS 30..453 CDD:391944 116/440 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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