DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6978 and slc17a6b

DIOPT Version :9

Sequence 1:NP_572188.1 Gene:CG6978 / 31413 FlyBaseID:FBgn0029727 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001122293.1 Gene:slc17a6b / 100149756 ZFINID:ZDB-GENE-030616-554 Length:584 Species:Danio rerio


Alignment Length:486 Identity:167/486 - (34%)
Similarity:255/486 - (52%) Gaps:29/486 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VSNRNRSDQEVRMERYASDGQI-----PRCRKT------RFFVVLMLFSGMANAYVMRTNMSVAI 66
            :..|.:..:.:.:.......||     |.|..|      |:.:.:|...|...::.:|.|:.|||
Zfish    30 IEKRQKPGENIELTEDGRPAQINERKAPLCDCTCFGLPRRYIIAIMSGLGFCISFGIRCNLGVAI 94

  Fly    67 VAMVNHTAISHTKSSTQSKERDGDFEWSYKLQGYILSSFFYGYVITQIPFGLMIKYYGARHFLGW 131
            |:|||::.| |.......||: ..|.|..:..|.|..|||:||::||||.|.:.....|....|.
Zfish    95 VSMVNNSTI-HLNGKIIIKEK-AKFNWDPETVGLIHGSFFWGYIVTQIPGGYISSRLAANRVFGA 157

  Fly   132 GMMINSLAAFFIPISARSGGVVGLCV--VRFIQGLGEGPIVPCSHSLLAQWVPPNERSLAGAAVY 194
            .:::.|....|||.:||  |..| ||  ||.:|||.||...|..|.:.::|.||.|||......:
Zfish   158 AILLTSTLNMFIPSAAR--GHYG-CVIFVRILQGLVEGVTYPACHGIWSKWAPPLERSRLATTSF 219

  Fly   195 AGAQFGTIVSMPLSGLLAHYGFDGGWPSIFYIFGLFSTIWCIIFICLVQESPAVSTRISEAERRH 259
            .|:..|.:::|||:|:|..|   .||.|:||::|.|...|.:.:|.:..||||....|:..||.:
Zfish   220 CGSYAGAVIAMPLAGILVQY---TGWSSVFYVYGCFGIFWYMFWILVSYESPAEHPTITAEERCY 281

  Fly   260 IMEAIWQAQ----PEERSRIPFLGIAKSPPFYAILVAHAGHNYGYETLMTMLPTYMYRVLNVNIR 320
            |.|:|.::.    |.::.:.|:.....|.|.|||:||:...::.:..|:...|.|...|....|.
Zfish   282 IEESIGESAKLLGPADKFKTPWRKFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEIS 346

  Fly   321 TNGIISSLPYLAMWILAIVFGILADCLIRRN-FSITVVRKLMNSLGQYGPAVALISVGFVHHSLW 384
            ..|::|:||:|.|.|:..:.|.|||.|..:| .|.|.|||:||..|....|..|:.||: .||..
Zfish   347 KVGMLSALPHLVMTIIVPIGGQLADHLRSKNILSTTTVRKIMNCGGFGMEATLLLIVGY-SHSKG 410

  Fly   385 LTSVIFILGMGLNGAIYCGFKINHLDLSPRFAGLLISVTNCVANLVGLMAPMVAGHVIDPKPSVE 449
            :.....:|.:|.:|....||.:||||::||:|.:|:.::|.|..|.|::.|::.|.:...| :.|
Zfish   411 VAISFLVLAVGFSGFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVGAMTKHK-TRE 474

  Fly   450 NWRIVFYIAAGVFIFTASFYNVFASG-KQQW 479
            .|:.||.||:.|......||.:|||| ||.|
Zfish   475 EWQYVFLIASLVHYGGVIFYGIFASGEKQPW 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6978NP_572188.1 2A0114euk 38..478 CDD:129972 160/453 (35%)
MFS 45..473 CDD:119392 153/434 (35%)
slc17a6bNP_001122293.1 2A0114euk 69..509 CDD:129972 161/447 (36%)
MFS 74..498 CDD:119392 153/433 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582656
Domainoid 1 1.000 42 1.000 Domainoid score I12425
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D497052at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100421
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.650

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