DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15471 and AT5G08200

DIOPT Version :10

Sequence 1:NP_572187.2 Gene:CG15471 / 31412 FlyBaseID:FBgn0029726 Length:128 Species:Drosophila melanogaster
Sequence 2:NP_196437.2 Gene:AT5G08200 / 830716 AraportID:AT5G08200 Length:409 Species:Arabidopsis thaliana


Alignment Length:126 Identity:27/126 - (21%)
Similarity:49/126 - (38%) Gaps:31/126 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLTEDRGPNICNCSRMRSECWTRHSITAEDTMTRLALKYDTSIGRICRANRMHSQDVLQARRHVW 67
            |.:.|||             :..|.|:..||:..:|:||...:..:.:.|.:.:...:.|.:.:.
plant    70 SNSPDRG-------------YIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQ 121

  Fly    68 VPIP----------NSQFQMG----CQEKSESDESPEISIRKVTPNLPSHFYRQSDPNPNP 114
            :|:|          |.....|    |.|    .|||..|.::|..:..|...:.|:...:|
plant   122 IPLPGRHPPSPCLSNGSLNHGEGCSCHE----PESPNHSEQEVFDSFQSLRLKSSEKKVSP 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15471NP_572187.2 LysM 26..69 CDD:396179 9/42 (21%)
AT5G08200NP_196437.2 LysM <71..112 CDD:440998 11/53 (21%)

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